Farooq A - Search Results

1

abc4pwm: affinity based clustering for position weight matrices in applications of DNA sequence analysis.

Ali O, Farooq A, Yang M, Jin VX, Bjørås M, Wang J. Ali O, et al. Among authors: farooq a. BMC Bioinformatics. 2022 Mar 3;23(1):83. doi: 10.1186/s12859-022-04615-z. BMC Bioinformatics. 2022. PMID: 35240993 Free PMC article.

2

IGAP-integrative genome analysis pipeline reveals new gene regulatory model associated with nonspecific TF-DNA binding affinity.

Sahaf Naeini A, Farooq A, Bjørås M, Wang J. Sahaf Naeini A, et al. Among authors: farooq a. Comput Struct Biotechnol J. 2020 Jun 2;18:1270-1286. doi: 10.1016/j.csbj.2020.05.024. eCollection 2020. Comput Struct Biotechnol J. 2020. PMID: 32612751 Free PMC article.

3

HMST-Seq-Analyzer: A new python tool for differential methylation and hydroxymethylation analysis in various DNA methylation sequencing data.

Farooq A, Grønmyr S, Ali O, Rognes T, Scheffler K, Bjørås M, Wang J. Farooq A, et al. Comput Struct Biotechnol J. 2020 Oct 10;18:2877-2889. doi: 10.1016/j.csbj.2020.09.038. eCollection 2020. Comput Struct Biotechnol J. 2020. PMID: 33163148 Free PMC article.

4

Integrating whole genome sequencing, methylation, gene expression, topological associated domain information in regulatory mutation prediction: A study of follicular lymphoma.

Farooq A, Trøen G, Delabie J, Wang J. Farooq A, et al. Comput Struct Biotechnol J. 2022 Mar 23;20:1726-1742. doi: 10.1016/j.csbj.2022.03.023. eCollection 2022. Comput Struct Biotechnol J. 2022. PMID: 35495111 Free PMC article.

5

Role of HbA1c in Mortality Among Patients With a Medical History of Ischemic Stroke and Paroxysmal Atrial Fibrillation: A Systematic Review.

Zubair M, Kainat Raza Naqvi S, Aslam R, Ahmad H, Farooq A, Islam S. Zubair M, et al. Among authors: farooq a. Cureus. 2024 Dec 18;16(12):e75925. doi: 10.7759/cureus.75925. eCollection 2024 Dec. Cureus. 2024. PMID: 39830535 Free PMC article. Review.

6

Global dissemination of the beta-lactam resistance gene blaTEM-1 among pathogenic bacteria.

Farooq A, Rafique A, Han E, Park SM. Farooq A, et al. Sci Total Environ. 2025 Jan 16;963:178521. doi: 10.1016/j.scitotenv.2025.178521. Online ahead of print. Sci Total Environ. 2025. PMID: 39824112

7

Explicit travelling wave solutions to the time fractional Phi-four equation and their applications in mathematical physics.

Farooq A, Shafique T, Abbas M, Birhanu A, Hamed YS. Farooq A, et al. Sci Rep. 2025 Jan 11;15(1):1683. doi: 10.1038/s41598-025-86177-7. Sci Rep. 2025. PMID: 39799256 Free PMC article.

8

Local excision for T1 rectal cancer: A population-based study of practice patterns and oncological outcomes.

Brennan KE, Farooq AO, Mckechnie TJ, Wiseman VH, Kong W, Bankhead CR, Heneghan CJ, Rai MS, Patel SV. Brennan KE, et al. Among authors: farooq ao. Colorectal Dis. 2025 Jan;27(1):e17276. doi: 10.1111/codi.17276. Colorectal Dis. 2025. PMID: 39797387 Free PMC article.

9

Limitation of life-sustaining treatments in Asian ICUs: theory versus practice.

Ling L, Li A, Phua J; MOSAICS II Study Group; Asian Critical Care Clinical Trials Group. Ling L, et al. Crit Care. 2025 Jan 6;29(1):9. doi: 10.1186/s13054-024-05241-2. Crit Care. 2025. PMID: 39762907 Free PMC article. No abstract available.

10

Pharmacokinetic/pharmacodynamic analysis of meropenem and fosfomycin combinations in in vitro time-kill and hollow-fibre infection models against multidrug-resistant and carbapenemase-producing Klebsiella pneumoniae.

Farooq A, Martens M, Kroemer N, Pfaffendorf C, Decousser JW, Nordmann P, Wicha SG. Farooq A, et al. J Antimicrob Chemother. 2024 Dec 26:dkae459. doi: 10.1093/jac/dkae459. Online ahead of print. J Antimicrob Chemother. 2024. PMID: 39723630

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