Kubiniok P - Search Results

1

Understanding the constitutive presentation of MHC class I immunopeptidomes in primary tissues.

Kubiniok P, Marcu A, Bichmann L, Kuchenbecker L, Schuster H, Hamelin DJ, Duquette JD, Kovalchik KA, Wessling L, Kohlbacher O, Rammensee HG, Neidert MC, Sirois I, Caron E. Kubiniok P, et al. iScience. 2022 Jan 18;25(2):103768. doi: 10.1016/j.isci.2022.103768. eCollection 2022 Feb 18. iScience. 2022. PMID: 35141507 Free PMC article.

2

MhcVizPipe: A Quality Control Software for Rapid Assessment of Small- to Large-Scale Immunopeptidome Datasets.

Kovalchik KA, Ma Q, Wessling L, Saab F, Duquette JD, Kubiniok P, Hamelin DJ, Faridi P, Li C, Purcell AW, Jang A, Paramithiotis E, Tognetti M, Reiter L, Bruderer R, Lanoix J, Bonneil É, Courcelles M, Thibault P, Caron E, Sirois I. Kovalchik KA, et al. Among authors: kubiniok p. Mol Cell Proteomics. 2022 Jan;21(1):100178. doi: 10.1016/j.mcpro.2021.100178. Epub 2021 Nov 17. Mol Cell Proteomics. 2022. PMID: 34798331 Free PMC article.

3

The Human Immunopeptidome Project: A Roadmap to Predict and Treat Immune Diseases.

Vizcaíno JA, Kubiniok P, Kovalchik KA, Ma Q, Duquette JD, Mongrain I, Deutsch EW, Peters B, Sette A, Sirois I, Caron E. Vizcaíno JA, et al. Among authors: kubiniok p. Mol Cell Proteomics. 2020 Jan;19(1):31-49. doi: 10.1074/mcp.R119.001743. Epub 2019 Nov 19. Mol Cell Proteomics. 2020. PMID: 31744855 Free PMC article.

4

[No title available]

[No authors listed] [No authors listed] PMID: 33451557

5

The mutational landscape of SARS-CoV-2 variants diversifies T cell targets in an HLA-supertype-dependent manner.

Hamelin DJ, Fournelle D, Grenier JC, Schockaert J, Kovalchik KA, Kubiniok P, Mostefai F, Duquette JD, Saab F, Sirois I, Smith MA, Pattijn S, Soudeyns H, Decaluwe H, Hussin J, Caron E. Hamelin DJ, et al. Among authors: kubiniok p. Cell Syst. 2022 Feb 16;13(2):143-157.e3. doi: 10.1016/j.cels.2021.09.013. Epub 2021 Oct 6. Cell Syst. 2022. PMID: 34637888 Free PMC article.

6

RHybridFinder: An R package to process immunopeptidomic data for putative hybrid peptide discovery.

Saab F, Hamelin DJ, Ma Q, Kovalchik KA, Sirois I, Faridi P, Li C, Purcell AW, Kubiniok P, Caron E. Saab F, et al. Among authors: kubiniok p. STAR Protoc. 2021 Oct 21;2(4):100875. doi: 10.1016/j.xpro.2021.100875. eCollection 2021 Dec 17. STAR Protoc. 2021. PMID: 34746858 Free PMC article.

7

Time-resolved Phosphoproteome Analysis of Paradoxical RAF Activation Reveals Novel Targets of ERK.

Kubiniok P, Lavoie H, Therrien M, Thibault P. Kubiniok P, et al. Mol Cell Proteomics. 2017 Apr;16(4):663-679. doi: 10.1074/mcp.M116.065128. Epub 2017 Feb 10. Mol Cell Proteomics. 2017. PMID: 28188228 Free PMC article.

8

Dynamic Phosphoproteomics Uncovers Signaling Pathways Modulated by Anti-oncogenic Sphingolipid Analogs.

Kubiniok P, Finicle BT, Piffaretti F, McCracken AN, Perryman M, Hanessian S, Edinger AL, Thibault P. Kubiniok P, et al. Mol Cell Proteomics. 2019 Mar;18(3):408-422. doi: 10.1074/mcp.RA118.001053. Epub 2018 Nov 27. Mol Cell Proteomics. 2019. PMID: 30482847 Free PMC article.

9

[No title available]

[No authors listed] [No authors listed] PMID: 33431118

10

Phosphoproteome dynamics of Saccharomyces cerevisiae under heat shock and cold stress.

Kanshin E, Kubiniok P, Thattikota Y, D'Amours D, Thibault P. Kanshin E, et al. Among authors: kubiniok p. Mol Syst Biol. 2015 Jun 3;11(6):813. doi: 10.15252/msb.20156170. Mol Syst Biol. 2015. PMID: 26040289 Free PMC article.

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