He Y - Search Results

1

ICEO, a biological ontology for representing and analyzing bacterial integrative and conjugative elements.

Liu M, Liu J, Liu G, Wang H, Wang X, Deng Z, He Y, Ou HY. Liu M, et al. Among authors: he y. Sci Data. 2022 Jan 20;9(1):11. doi: 10.1038/s41597-021-01112-5. Sci Data. 2022. PMID: 35058462 Free PMC article.

2

Ontology-supported research on vaccine efficacy, safety and integrative biological networks.

He Y. He Y. Expert Rev Vaccines. 2014 Jul;13(7):825-41. doi: 10.1586/14760584.2014.923762. Epub 2014 Jun 7. Expert Rev Vaccines. 2014. PMID: 24909153 Free PMC article. Review.

3

VRprofile: gene-cluster-detection-based profiling of virulence and antibiotic resistance traits encoded within genome sequences of pathogenic bacteria.

Li J, Tai C, Deng Z, Zhong W, He Y, Ou HY. Li J, et al. Among authors: he y. Brief Bioinform. 2018 Jul 20;19(4):566-574. doi: 10.1093/bib/bbw141. Brief Bioinform. 2018. PMID: 28077405

4

The eXtensible ontology development (XOD) principles and tool implementation to support ontology interoperability.

He Y, Xiang Z, Zheng J, Lin Y, Overton JA, Ong E. He Y, et al. J Biomed Semantics. 2018 Jan 12;9(1):3. doi: 10.1186/s13326-017-0169-2. J Biomed Semantics. 2018. PMID: 29329592 Free PMC article. Review.

5

OHMI: the ontology of host-microbiome interactions.

He Y, Wang H, Zheng J, Beiting DP, Masci AM, Yu H, Liu K, Wu J, Curtis JL, Smith B, Alekseyenko AV, Obeid JS. He Y, et al. J Biomed Semantics. 2019 Dec 30;10(1):25. doi: 10.1186/s13326-019-0217-1. J Biomed Semantics. 2019. PMID: 31888755 Free PMC article.

6

CIDO, a community-based ontology for coronavirus disease knowledge and data integration, sharing, and analysis.

He Y, Yu H, Ong E, Wang Y, Liu Y, Huffman A, Huang HH, Beverley J, Hur J, Yang X, Chen L, Omenn GS, Athey B, Smith B. He Y, et al. Sci Data. 2020 Jun 12;7(1):181. doi: 10.1038/s41597-020-0523-6. Sci Data. 2020. PMID: 32533075 Free PMC article.

7

Ontological modeling and analysis of experimentally or clinically verified drugs against coronavirus infection.

Liu Y, Hur J, Chan WKB, Wang Z, Xie J, Sun D, Handelman S, Sexton J, Yu H, He Y. Liu Y, et al. Among authors: he y. Sci Data. 2021 Jan 13;8(1):16. doi: 10.1038/s41597-021-00799-w. Sci Data. 2021. PMID: 33441564 Free PMC article.

8

Brucellosis Ontology (IDOBRU) as an extension of the Infectious Disease Ontology.

Lin Y, Xiang Z, He Y. Lin Y, et al. Among authors: he y. J Biomed Semantics. 2011 Oct 31;2(1):9. doi: 10.1186/2041-1480-2-9. J Biomed Semantics. 2011. PMID: 22041276 Free PMC article.

9

The Ontology of Vaccine Adverse Events (OVAE) and its usage in representing and analyzing adverse events associated with US-licensed human vaccines.

Marcos E, Zhao B, He Y. Marcos E, et al. Among authors: he y. J Biomed Semantics. 2013 Nov 26;4(1):40. doi: 10.1186/2041-1480-4-40. J Biomed Semantics. 2013. PMID: 24279920 Free PMC article.

10

Ontodog: a web-based ontology community view generation tool.

Zheng J, Xiang Z, Stoeckert CJ Jr, He Y. Zheng J, et al. Among authors: he y. Bioinformatics. 2014 May 1;30(9):1340-2. doi: 10.1093/bioinformatics/btu008. Epub 2014 Jan 9. Bioinformatics. 2014. PMID: 24413522 Free PMC article.

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