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Reconfigurable asymmetric protein assemblies through implicit negative design.
Sahtoe DD, Praetorius F, Courbet A, Hsia Y, Wicky BIM, Edman NI, Miller LM, Timmermans BJR, Decarreau J, Morris HM, Kang A, Bera AK, Baker D. Sahtoe DD, et al. Among authors: baker d. Science. 2022 Jan 21;375(6578):eabj7662. doi: 10.1126/science.abj7662. Epub 2022 Jan 21. Science. 2022. PMID: 35050655 Free PMC article.
Computational design of protein-protein interactions.
Kortemme T, Baker D. Kortemme T, et al. Among authors: baker d. Curr Opin Chem Biol. 2004 Feb;8(1):91-7. doi: 10.1016/j.cbpa.2003.12.008. Curr Opin Chem Biol. 2004. PMID: 15036162 Review.
Progress in modeling of protein structures and interactions.
Schueler-Furman O, Wang C, Bradley P, Misura K, Baker D. Schueler-Furman O, et al. Among authors: baker d. Science. 2005 Oct 28;310(5748):638-42. doi: 10.1126/science.1112160. Science. 2005. PMID: 16254179 Review.
Prediction of the structure of symmetrical protein assemblies.
André I, Bradley P, Wang C, Baker D. André I, et al. Among authors: baker d. Proc Natl Acad Sci U S A. 2007 Nov 6;104(45):17656-61. doi: 10.1073/pnas.0702626104. Epub 2007 Oct 31. Proc Natl Acad Sci U S A. 2007. PMID: 17978193 Free PMC article.
De novo computational design of retro-aldol enzymes.
Jiang L, Althoff EA, Clemente FR, Doyle L, Röthlisberger D, Zanghellini A, Gallaher JL, Betker JL, Tanaka F, Barbas CF 3rd, Hilvert D, Houk KN, Stoddard BL, Baker D. Jiang L, et al. Among authors: baker d. Science. 2008 Mar 7;319(5868):1387-91. doi: 10.1126/science.1152692. Science. 2008. PMID: 18323453 Free PMC article.
Simultaneous prediction of protein folding and docking at high resolution.
Das R, André I, Shen Y, Wu Y, Lemak A, Bansal S, Arrowsmith CH, Szyperski T, Baker D. Das R, et al. Among authors: baker d. Proc Natl Acad Sci U S A. 2009 Nov 10;106(45):18978-83. doi: 10.1073/pnas.0904407106. Epub 2009 Oct 28. Proc Natl Acad Sci U S A. 2009. PMID: 19864631 Free PMC article.
NMR structure determination for larger proteins using backbone-only data.
Raman S, Lange OF, Rossi P, Tyka M, Wang X, Aramini J, Liu G, Ramelot TA, Eletsky A, Szyperski T, Kennedy MA, Prestegard J, Montelione GT, Baker D. Raman S, et al. Among authors: baker d. Science. 2010 Feb 19;327(5968):1014-8. doi: 10.1126/science.1183649. Epub 2010 Feb 4. Science. 2010. PMID: 20133520 Free PMC article.
5,818 results