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Managing High-Density Genotyping Data with Gigwa.
Sempéré G, Larmande P, Rouard M. Sempéré G, et al. Among authors: rouard m. Methods Mol Biol. 2022;2443:415-427. doi: 10.1007/978-1-0716-2067-0_21. Methods Mol Biol. 2022. PMID: 35037218
MGIS: managing banana (Musa spp.) genetic resources information and high-throughput genotyping data.
Ruas M, Guignon V, Sempere G, Sardos J, Hueber Y, Duvergey H, Andrieu A, Chase R, Jenny C, Hazekamp T, Irish B, Jelali K, Adeka J, Ayala-Silva T, Chao CP, Daniells J, Dowiya B, Effa Effa B, Gueco L, Herradura L, Ibobondji L, Kempenaers E, Kilangi J, Muhangi S, Ngo Xuan P, Paofa J, Pavis C, Thiemele D, Tossou C, Sandoval J, Sutanto A, Vangu Paka G, Yi G, Van den Houwe I, Roux N, Rouard M. Ruas M, et al. Among authors: rouard m. Database (Oxford). 2017 Jan 1;2017:bax046. doi: 10.1093/database/bax046. Database (Oxford). 2017. PMID: 29220435 Free PMC article.
BrAPI-an application programming interface for plant breeding applications.
Selby P, Abbeloos R, Backlund JE, Basterrechea Salido M, Bauchet G, Benites-Alfaro OE, Birkett C, Calaminos VC, Carceller P, Cornut G, Vasques Costa B, Edwards JD, Finkers R, Yanxin Gao S, Ghaffar M, Glaser P, Guignon V, Hok P, Kilian A, König P, Lagare JEB, Lange M, Laporte MA, Larmande P, LeBauer DS, Lyon DA, Marshall DS, Matthews D, Milne I, Mistry N, Morales N, Mueller LA, Neveu P, Papoutsoglou E, Pearce B, Perez-Masias I, Pommier C, Ramírez-González RH, Rathore A, Raquel AM, Raubach S, Rife T, Robbins K, Rouard M, Sarma C, Scholz U, Sempéré G, Shaw PD, Simon R, Soldevilla N, Stephen G, Sun Q, Tovar C, Uszynski G, Verouden M; BrAPI consortium. Selby P, et al. Among authors: rouard m. Bioinformatics. 2019 Oct 15;35(20):4147-4155. doi: 10.1093/bioinformatics/btz190. Bioinformatics. 2019. PMID: 30903186 Free PMC article.
Gigwa v2-Extended and improved genotype investigator.
Sempéré G, Pétel A, Rouard M, Frouin J, Hueber Y, De Bellis F, Larmande P. Sempéré G, et al. Among authors: rouard m. Gigascience. 2019 May 1;8(5):giz051. doi: 10.1093/gigascience/giz051. Gigascience. 2019. PMID: 31077313 Free PMC article.
The banana genome hub: a community database for genomics in the Musaceae.
Droc G, Martin G, Guignon V, Summo M, Sempéré G, Durant E, Soriano A, Baurens FC, Cenci A, Breton C, Shah T, Aury JM, Ge XJ, Harrison PH, Yahiaoui N, D'Hont A, Rouard M. Droc G, et al. Among authors: rouard m. Hortic Res. 2022 Sep 28;9:uhac221. doi: 10.1093/hr/uhac221. eCollection 2022. Hortic Res. 2022. PMID: 36479579 Free PMC article.
The coffee genome hub: a resource for coffee genomes.
Dereeper A, Bocs S, Rouard M, Guignon V, Ravel S, Tranchant-Dubreuil C, Poncet V, Garsmeur O, Lashermes P, Droc G. Dereeper A, et al. Among authors: rouard m. Nucleic Acids Res. 2015 Jan;43(Database issue):D1028-35. doi: 10.1093/nar/gku1108. Epub 2014 Nov 11. Nucleic Acids Res. 2015. PMID: 25392413 Free PMC article.
Ten simple rules for developing visualization tools in genomics.
Durant E, Rouard M, Ganko EW, Muller C, Cleary AM, Farmer AD, Conte M, Sabot F. Durant E, et al. Among authors: rouard m. PLoS Comput Biol. 2022 Nov 10;18(11):e1010622. doi: 10.1371/journal.pcbi.1010622. eCollection 2022 Nov. PLoS Comput Biol. 2022. PMID: 36355753 Free PMC article. No abstract available.
A Genome-Wide Association Study on the Seedless Phenotype in Banana (Musa spp.) Reveals the Potential of a Selected Panel to Detect Candidate Genes in a Vegetatively Propagated Crop.
Sardos J, Rouard M, Hueber Y, Cenci A, Hyma KE, van den Houwe I, Hribova E, Courtois B, Roux N. Sardos J, et al. Among authors: rouard m. PLoS One. 2016 May 4;11(5):e0154448. doi: 10.1371/journal.pone.0154448. eCollection 2016. PLoS One. 2016. PMID: 27144345 Free PMC article.
75 results