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Phased, chromosome-scale genome assemblies of tetraploid potato reveal a complex genome, transcriptome, and predicted proteome landscape underpinning genetic diversity.
Hoopes G, Meng X, Hamilton JP, Achakkagari SR, de Alves Freitas Guesdes F, Bolger ME, Coombs JJ, Esselink D, Kaiser NR, Kodde L, Kyriakidou M, Lavrijssen B, van Lieshout N, Shereda R, Tuttle HK, Vaillancourt B, Wood JC, de Boer JM, Bornowski N, Bourke P, Douches D, van Eck HJ, Ellis D, Feldman MJ, Gardner KM, Hopman JCP, Jiang J, De Jong WS, Kuhl JC, Novy RG, Oome S, Sathuvalli V, Tan EH, Ursum RA, Vales MI, Vining K, Visser RGF, Vossen J, Yencho GC, Anglin NL, Bachem CWB, Endelman JB, Shannon LM, Strömvik MV, Tai HH, Usadel B, Buell CR, Finkers R. Hoopes G, et al. Among authors: shannon lm. Mol Plant. 2022 Mar 7;15(3):520-536. doi: 10.1016/j.molp.2022.01.003. Epub 2022 Jan 10. Mol Plant. 2022. PMID: 35026436 Free article.
Genotype-by-environment interactions and local adaptation shape selection in the US National Chip Processing Trial.
Agha HI, Endelman JB, Chitwood-Brown J, Clough M, Coombs J, De Jong WS, Douches DS, Higgins CR, Holm DG, Novy R, Resende MFR, Sathuvalli V, Thompson AL, Yencho GC, Zotarelli L, Shannon LM. Agha HI, et al. Among authors: shannon lm. Theor Appl Genet. 2024 Apr 10;137(5):99. doi: 10.1007/s00122-024-04610-3. Theor Appl Genet. 2024. PMID: 38598016 Free PMC article.
Targeted genotyping-by-sequencing of potato and data analysis with R/polyBreedR.
Endelman JB, Kante M, Lindqvist-Kreuze H, Kilian A, Shannon LM, Caraza-Harter MV, Vaillancourt B, Mailloux K, Hamilton JP, Buell CR. Endelman JB, et al. Among authors: shannon lm. Plant Genome. 2024 Sep;17(3):e20484. doi: 10.1002/tpg2.20484. Epub 2024 Jun 17. Plant Genome. 2024. PMID: 38887158 Free article.
Phenylpropanoids Are Connected to Cell Wall Fortification and Stress Tolerance in Avocado Somatic Embryogenesis.
Olivares-García CA, Mata-Rosas M, Peña-Montes C, Quiroz-Figueroa F, Segura-Cabrera A, Shannon LM, Loyola-Vargas VM, Monribot-Villanueva JL, Elizalde-Contreras JM, Ibarra-Laclette E, Ramirez-Vázquez M, Guerrero-Analco JA, Ruiz-May E. Olivares-García CA, et al. Among authors: shannon lm. Int J Mol Sci. 2020 Aug 8;21(16):5679. doi: 10.3390/ijms21165679. Int J Mol Sci. 2020. PMID: 32784357 Free PMC article.
77 results