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Page 1
Genomes shed light on the evolution of Begonia, a mega-diverse genus.
Li L, Chen X, Fang D, Dong S, Guo X, Li N, Campos-Dominguez L, Wang W, Liu Y, Lang X, Peng Y, Tian D, Thomas DC, Mu W, Liu M, Wu C, Yang T, Zhang S, Yang L, Yang J, Liu ZJ, Zhang L, Zhang X, Chen F, Jiao Y, Guo Y, Hughes M, Wang W, Liu X, Zhong C, Li A, Sahu SK, Yang H, Wu E, Sharbrough J, Lisby M, Liu X, Xu X, Soltis DE, Van de Peer Y, Kidner C, Zhang S, Liu H. Li L, et al. Among authors: xu x. New Phytol. 2022 Apr;234(1):295-310. doi: 10.1111/nph.17949. Epub 2022 Feb 9. New Phytol. 2022. PMID: 34997964 Free PMC article.
Single-cell exome sequencing and monoclonal evolution of a JAK2-negative myeloproliferative neoplasm.
Hou Y, Song L, Zhu P, Zhang B, Tao Y, Xu X, Li F, Wu K, Liang J, Shao D, Wu H, Ye X, Ye C, Wu R, Jian M, Chen Y, Xie W, Zhang R, Chen L, Liu X, Yao X, Zheng H, Yu C, Li Q, Gong Z, Mao M, Yang X, Yang L, Li J, Wang W, Lu Z, Gu N, Laurie G, Bolund L, Kristiansen K, Wang J, Yang H, Li Y, Zhang X, Wang J. Hou Y, et al. Among authors: xu x. Cell. 2012 Mar 2;148(5):873-85. doi: 10.1016/j.cell.2012.02.028. Cell. 2012. PMID: 22385957 Free article.
Genome sequence of foxtail millet (Setaria italica) provides insights into grass evolution and biofuel potential.
Zhang G, Liu X, Quan Z, Cheng S, Xu X, Pan S, Xie M, Zeng P, Yue Z, Wang W, Tao Y, Bian C, Han C, Xia Q, Peng X, Cao R, Yang X, Zhan D, Hu J, Zhang Y, Li H, Li H, Li N, Wang J, Wang C, Wang R, Guo T, Cai Y, Liu C, Xiang H, Shi Q, Huang P, Chen Q, Li Y, Wang J, Zhao Z, Wang J. Zhang G, et al. Among authors: xu x. Nat Biotechnol. 2012 May 13;30(6):549-54. doi: 10.1038/nbt.2195. Nat Biotechnol. 2012. PMID: 22580950
The Tarenaya hassleriana genome provides insight into reproductive trait and genome evolution of crucifers.
Cheng S, van den Bergh E, Zeng P, Zhong X, Xu J, Liu X, Hofberger J, de Bruijn S, Bhide AS, Kuelahoglu C, Bian C, Chen J, Fan G, Kaufmann K, Hall JC, Becker A, Bräutigam A, Weber AP, Shi C, Zheng Z, Li W, Lv M, Tao Y, Wang J, Zou H, Quan Z, Hibberd JM, Zhang G, Zhu XG, Xu X, Schranz ME. Cheng S, et al. Among authors: xu x, xu j. Plant Cell. 2013 Aug;25(8):2813-30. doi: 10.1105/tpc.113.113480. Epub 2013 Aug 27. Plant Cell. 2013. PMID: 23983221 Free PMC article.
The genome sequence of the orchid Phalaenopsis equestris.
Cai J, Liu X, Vanneste K, Proost S, Tsai WC, Liu KW, Chen LJ, He Y, Xu Q, Bian C, Zheng Z, Sun F, Liu W, Hsiao YY, Pan ZJ, Hsu CC, Yang YP, Hsu YC, Chuang YC, Dievart A, Dufayard JF, Xu X, Wang JY, Wang J, Xiao XJ, Zhao XM, Du R, Zhang GQ, Wang M, Su YY, Xie GC, Liu GH, Li LQ, Huang LQ, Luo YB, Chen HH, Van de Peer Y, Liu ZJ. Cai J, et al. Among authors: xu q, xu x. Nat Genet. 2015 Jan;47(1):65-72. doi: 10.1038/ng.3149. Epub 2014 Nov 24. Nat Genet. 2015. PMID: 25420146
Mudskipper genomes provide insights into the terrestrial adaptation of amphibious fishes.
You X, Bian C, Zan Q, Xu X, Liu X, Chen J, Wang J, Qiu Y, Li W, Zhang X, Sun Y, Chen S, Hong W, Li Y, Cheng S, Fan G, Shi C, Liang J, Tom Tang Y, Yang C, Ruan Z, Bai J, Peng C, Mu Q, Lu J, Fan M, Yang S, Huang Z, Jiang X, Fang X, Zhang G, Zhang Y, Polgar G, Yu H, Li J, Liu Z, Zhang G, Ravi V, Coon SL, Wang J, Yang H, Venkatesh B, Wang J, Shi Q. You X, et al. Among authors: xu x. Nat Commun. 2014 Dec 2;5:5594. doi: 10.1038/ncomms6594. Nat Commun. 2014. PMID: 25463417 Free PMC article.
The Symbiodinium kawagutii genome illuminates dinoflagellate gene expression and coral symbiosis.
Lin S, Cheng S, Song B, Zhong X, Lin X, Li W, Li L, Zhang Y, Zhang H, Ji Z, Cai M, Zhuang Y, Shi X, Lin L, Wang L, Wang Z, Liu X, Yu S, Zeng P, Hao H, Zou Q, Chen C, Li Y, Wang Y, Xu C, Meng S, Xu X, Wang J, Yang H, Campbell DA, Sturm NR, Dagenais-Bellefeuille S, Morse D. Lin S, et al. Among authors: xu c, xu x. Science. 2015 Nov 6;350(6261):691-4. doi: 10.1126/science.aad0408. Science. 2015. PMID: 26542574 Free article.
The Sinocyclocheilus cavefish genome provides insights into cave adaptation.
Yang J, Chen X, Bai J, Fang D, Qiu Y, Jiang W, Yuan H, Bian C, Lu J, He S, Pan X, Zhang Y, Wang X, You X, Wang Y, Sun Y, Mao D, Liu Y, Fan G, Zhang H, Chen X, Zhang X, Zheng L, Wang J, Cheng L, Chen J, Ruan Z, Li J, Yu H, Peng C, Ma X, Xu J, He Y, Xu Z, Xu P, Wang J, Yang H, Wang J, Whitten T, Xu X, Shi Q. Yang J, et al. Among authors: xu p, xu x, xu j, xu z. BMC Biol. 2016 Jan 4;14:1. doi: 10.1186/s12915-015-0223-4. BMC Biol. 2016. PMID: 26728391 Free PMC article.
The Asian arowana (Scleropages formosus) genome provides new insights into the evolution of an early lineage of teleosts.
Bian C, Hu Y, Ravi V, Kuznetsova IS, Shen X, Mu X, Sun Y, You X, Li J, Li X, Qiu Y, Tay BH, Thevasagayam NM, Komissarov AS, Trifonov V, Kabilov M, Tupikin A, Luo J, Liu Y, Song H, Liu C, Wang X, Gu D, Yang Y, Li W, Polgar G, Fan G, Zeng P, Zhang H, Xiong Z, Tang Z, Peng C, Ruan Z, Yu H, Chen J, Fan M, Huang Y, Wang M, Zhao X, Hu G, Yang H, Wang J, Wang J, Xu X, Song L, Xu G, Xu P, Xu J, O'Brien SJ, Orbán L, Venkatesh B, Shi Q. Bian C, et al. Among authors: xu p, xu g, xu x, xu j. Sci Rep. 2016 Apr 19;6:24501. doi: 10.1038/srep24501. Sci Rep. 2016. PMID: 27089831 Free PMC article.
Multiple IgH Isotypes Including IgD, Subclasses of IgM, and IgY Are Expressed in the Common Ancestors of Modern Birds.
Han B, Yuan H, Wang T, Li B, Ma L, Yu S, Huang T, Li Y, Fang D, Chen X, Wang Y, Qiu S, Guo Y, Fei J, Ren L, Pan-Hammarström Q, Hammarström L, Wang J, Wang J, Hou Y, Pan Q, Xu X, Zhao Y. Han B, et al. Among authors: xu x. J Immunol. 2016 Jun 15;196(12):5138-47. doi: 10.4049/jimmunol.1600307. Epub 2016 May 16. J Immunol. 2016. PMID: 27183632
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