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Sensei: how many samples to tell a change in cell type abundance?
Liang S, Willis J, Dou J, Mohanty V, Huang Y, Vilar E, Chen K. Liang S, et al. Among authors: vilar e. BMC Bioinformatics. 2022 Jan 4;23(1):2. doi: 10.1186/s12859-021-04526-5. BMC Bioinformatics. 2022. PMID: 34983369 Free PMC article.
Colorectal premalignancy is associated with consensus molecular subtypes 1 and 2.
Chang K, Willis JA, Reumers J, Taggart MW, San Lucas FA, Thirumurthi S, Kanth P, Delker DA, Hagedorn CH, Lynch PM, Ellis LM, Hawk ET, Scheet PA, Kopetz S, Arts J, Guinney J, Dienstmann R, Vilar E. Chang K, et al. Among authors: vilar e. Ann Oncol. 2018 Oct 1;29(10):2061-2067. doi: 10.1093/annonc/mdy337. Ann Oncol. 2018. PMID: 30412224 Free PMC article.
The Transcriptomic Landscape of Mismatch Repair-Deficient Intestinal Stem Cells.
Bommi PV, Bowen CM, Reyes-Uribe L, Wu W, Katayama H, Rocha P, Parra ER, Francisco-Cruz A, Ozcan Z, Tosti E, Willis JA, Wu H, Taggart MW, Burks JK, Lynch PM, Edelmann W, Scheet PA, Wistuba II, Sinha KM, Hanash SM, Vilar E. Bommi PV, et al. Among authors: vilar e. Cancer Res. 2021 May 15;81(10):2760-2773. doi: 10.1158/0008-5472.CAN-20-2896. Epub 2021 Mar 18. Cancer Res. 2021. PMID: 34003775 Free PMC article.
Loss of MMR and TGFBR2 Increases the Susceptibility to Microbiota-Dependent Inflammation-Associated Colon Cancer.
Tosti E, Almeida AS, Tran TTT, Barbachan E Silva M, Broin PÓ, Dubin R, Chen K, Beck AP, Mclellan AS, Vilar E, Golden A, O'Toole PW, Edelmann W. Tosti E, et al. Among authors: vilar e. Cell Mol Gastroenterol Hepatol. 2022;14(3):693-717. doi: 10.1016/j.jcmgh.2022.05.010. Epub 2022 Jun 7. Cell Mol Gastroenterol Hepatol. 2022. PMID: 35688320 Free PMC article.
Resistance Mechanisms to Anti-Epidermal Growth Factor Receptor Therapy in RAS/RAF Wild-Type Colorectal Cancer Vary by Regimen and Line of Therapy.
Parseghian CM, Sun R, Woods M, Napolitano S, Lee HM, Alshenaifi J, Willis J, Nunez S, Raghav KP, Morris VK, Shen JP, Eluri M, Sorokin A, Kanikarla P, Vilar E, Rehn M, Ang A, Troiani T, Kopetz S. Parseghian CM, et al. Among authors: vilar e. J Clin Oncol. 2023 Jan 20;41(3):460-471. doi: 10.1200/JCO.22.01423. Epub 2022 Nov 9. J Clin Oncol. 2023. PMID: 36351210 Free PMC article.
250 results