Haase SB - Search Results

1

Inherent Dynamics Visualizer, an Interactive Application for Evaluating and Visualizing Outputs from a Gene Regulatory Network Inference Pipeline.

Moseley RC, Campione S, Cummins B, Motta F, Haase SB. Moseley RC, et al. Among authors: haase sb. J Vis Exp. 2021 Dec 7;(178):10.3791/63084. doi: 10.3791/63084. J Vis Exp. 2021. PMID: 34958073 Free PMC article.

2

Reconciling conflicting models for global control of cell-cycle transcription.

Cho CY, Motta FC, Kelliher CM, Deckard A, Haase SB. Cho CY, et al. Among authors: haase sb. Cell Cycle. 2017 Oct 18;16(20):1965-1978. doi: 10.1080/15384101.2017.1367073. Epub 2017 Sep 21. Cell Cycle. 2017. PMID: 28934013 Free PMC article.

3

Layers of regulation of cell-cycle gene expression in the budding yeast Saccharomyces cerevisiae.

Kelliher CM, Foster MW, Motta FC, Deckard A, Soderblom EJ, Moseley MA, Haase SB. Kelliher CM, et al. Among authors: haase sb. Mol Biol Cell. 2018 Nov 1;29(22):2644-2655. doi: 10.1091/mbc.E18-04-0255. Epub 2018 Sep 12. Mol Biol Cell. 2018. PMID: 30207828 Free PMC article.

4

Conservation and Diversification of Circadian Rhythmicity Between a Model Crassulacean Acid Metabolism Plant Kalanchoë fedtschenkoi and a Model C₃ Photosynthesis Plant Arabidopsis thaliana.

Moseley RC, Mewalal R, Motta F, Tuskan GA, Haase S, Yang X. Moseley RC, et al. Front Plant Sci. 2018 Nov 28;9:1757. doi: 10.3389/fpls.2018.01757. eCollection 2018. Front Plant Sci. 2018. PMID: 30546378 Free PMC article.

5

Using extremal events to characterize noisy time series.

Berry E, Cummins B, Nerem RR, Smith LM, Haase SB, Gedeon T. Berry E, et al. Among authors: haase sb. J Math Biol. 2020 Apr;80(5):1523-1557. doi: 10.1007/s00285-020-01471-4. Epub 2020 Feb 1. J Math Biol. 2020. PMID: 32008103 Free PMC article.

6

An intrinsic oscillator drives the blood stage cycle of the malaria parasite Plasmodium falciparum.

Smith LM, Motta FC, Chopra G, Moch JK, Nerem RR, Cummins B, Roche KE, Kelliher CM, Leman AR, Harer J, Gedeon T, Waters NC, Haase SB. Smith LM, et al. Among authors: haase sb. Science. 2020 May 15;368(6492):754-759. doi: 10.1126/science.aba4357. Science. 2020. PMID: 32409472 Free PMC article.

7

Improved datasets and evaluation methods for the automatic prediction of DNA-binding proteins.

Zaitzeff A, Leiby N, Motta FC, Haase SB, Singer JM. Zaitzeff A, et al. Among authors: haase sb. Bioinformatics. 2021 Dec 22;38(1):44-51. doi: 10.1093/bioinformatics/btab603. Bioinformatics. 2021. PMID: 34415301

8

Inference of Gene Regulatory Network Uncovers the Linkage between Circadian Clock and Crassulacean Acid Metabolism in Kalanchoë fedtschenkoi.

Moseley RC, Motta F, Tuskan GA, Haase SB, Yang X. Moseley RC, et al. Among authors: haase sb. Cells. 2021 Aug 27;10(9):2217. doi: 10.3390/cells10092217. Cells. 2021. PMID: 34571864 Free PMC article.

9

Impact of Sickle Cell Trait Hemoglobin on the Intraerythrocytic Transcriptional Program of Plasmodium falciparum.

Saelens JW, Petersen JEV, Freedman E, Moseley RC, Konaté D, Diakité SAS, Traoré K, Vance N, Fairhurst RM, Diakité M, Haase SB, Taylor SM. Saelens JW, et al. Among authors: haase sb. mSphere. 2021 Oct 27;6(5):e0075521. doi: 10.1128/mSphere.00755-21. Epub 2021 Oct 20. mSphere. 2021. PMID: 34668757 Free PMC article.

10

Round Trip: An Automated Pipeline for Experimental Design, Execution, and Analysis.

Bryce D, Goldman RP, DeHaven M, Beal J, Bartley B, Nguyen TT, Walczak N, Weston M, Zheng G, Nowak J, Lee P, Stubbs J, Gaffney N, Vaughn MW, Myers CJ, Moseley RC, Haase S, Deckard A, Cummins B, Leiby N. Bryce D, et al. ACS Synth Biol. 2022 Feb 18;11(2):608-622. doi: 10.1021/acssynbio.1c00305. Epub 2022 Jan 31. ACS Synth Biol. 2022. PMID: 35099189

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