Chan CX - Search Results

1

Nuclear genome of a pedinophyte pinpoints genomic innovation and streamlining in the green algae.

Repetti SI, Iha C, Uthanumallian K, Jackson CJ, Chen Y, Chan CX, Verbruggen H. Repetti SI, et al. Among authors: chan cx. New Phytol. 2022 Mar;233(5):2144-2154. doi: 10.1111/nph.17926. Epub 2022 Jan 6. New Phytol. 2022. PMID: 34923642 Free article.

2

Biotic interactions as drivers of algal origin and evolution.

Brodie J, Ball SG, Bouget FY, Chan CX, De Clerck O, Cock JM, Gachon C, Grossman AR, Mock T, Raven JA, Saha M, Smith AG, Vardi A, Yoon HS, Bhattacharya D. Brodie J, et al. Among authors: chan cx. New Phytol. 2017 Nov;216(3):670-681. doi: 10.1111/nph.14760. Epub 2017 Aug 31. New Phytol. 2017. PMID: 28857164 Free article. Review.

3

Plastid phylogenomics with broad taxon sampling further elucidates the distinct evolutionary origins and timing of secondary green plastids.

Jackson C, Knoll AH, Chan CX, Verbruggen H. Jackson C, et al. Among authors: chan cx. Sci Rep. 2018 Jan 24;8(1):1523. doi: 10.1038/s41598-017-18805-w. Sci Rep. 2018. PMID: 29367699 Free PMC article.

4

Evidence That Inconsistent Gene Prediction Can Mislead Analysis of Dinoflagellate Genomes.

Chen Y, González-Pech RA, Stephens TG, Bhattacharya D, Chan CX. Chen Y, et al. Among authors: chan cx. J Phycol. 2020 Feb;56(1):6-10. doi: 10.1111/jpy.12947. J Phycol. 2020. PMID: 31713873 Free PMC article.

5

Sex in Symbiodiniaceae dinoflagellates: genomic evidence for independent loss of the canonical synaptonemal complex.

Shah S, Chen Y, Bhattacharya D, Chan CX. Shah S, et al. Among authors: chan cx. Sci Rep. 2020 Jun 17;10(1):9792. doi: 10.1038/s41598-020-66429-4. Sci Rep. 2020. PMID: 32555361 Free PMC article. Review.

6

Genomic adaptations to an endolithic lifestyle in the coral-associated alga Ostreobium.

Iha C, Dougan KE, Varela JA, Avila V, Jackson CJ, Bogaert KA, Chen Y, Judd LM, Wick R, Holt KE, Pasella MM, Ricci F, Repetti SI, Medina M, Marcelino VR, Chan CX, Verbruggen H. Iha C, et al. Among authors: chan cx. Curr Biol. 2021 Apr 12;31(7):1393-1402.e5. doi: 10.1016/j.cub.2021.01.018. Epub 2021 Feb 5. Curr Biol. 2021. PMID: 33548192 Free article.

7

Comparison of 15 dinoflagellate genomes reveals extensive sequence and structural divergence in family Symbiodiniaceae and genus Symbiodinium.

González-Pech RA, Stephens TG, Chen Y, Mohamed AR, Cheng Y, Shah S, Dougan KE, Fortuin MDA, Lagorce R, Burt DW, Bhattacharya D, Ragan MA, Chan CX. González-Pech RA, et al. Among authors: chan cx. BMC Biol. 2021 Apr 13;19(1):73. doi: 10.1186/s12915-021-00994-6. BMC Biol. 2021. PMID: 33849527 Free PMC article.

8

Comparative Genomics Supports That Brazilian Bioethanol Saccharomyces cerevisiae Comprise a Unified Group of Domesticated Strains Related to Cachaça Spirit Yeasts.

Jacobus AP, Stephens TG, Youssef P, González-Pech R, Ciccotosto-Camp MM, Dougan KE, Chen Y, Basso LC, Frazzon J, Chan CX, Gross J. Jacobus AP, et al. Among authors: chan cx. Front Microbiol. 2021 Apr 15;12:644089. doi: 10.3389/fmicb.2021.644089. eCollection 2021. Front Microbiol. 2021. PMID: 33936002 Free PMC article.

9

Inferring Phylogenomic Relationship of Microbes Using Scalable Alignment-Free Methods.

Bernard G, Stephens TG, González-Pech RA, Chan CX. Bernard G, et al. Among authors: chan cx. Methods Mol Biol. 2021;2242:69-76. doi: 10.1007/978-1-0716-1099-2_5. Methods Mol Biol. 2021. PMID: 33961218

10

Tightly Constrained Genome Reduction and Relaxation of Purifying Selection during Secondary Plastid Endosymbiosis.

Uthanumallian K, Iha C, Repetti SI, Chan CX, Bhattacharya D, Duchene S, Verbruggen H. Uthanumallian K, et al. Among authors: chan cx. Mol Biol Evol. 2022 Jan 7;39(1):msab295. doi: 10.1093/molbev/msab295. Mol Biol Evol. 2022. PMID: 34613411 Free PMC article.

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