Xu M - Search Results

1

Cryo-shift: reducing domain shift in cryo-electron subtomograms with unsupervised domain adaptation and randomization.

Bandyopadhyay H, Deng Z, Ding L, Liu S, Uddin MR, Zeng X, Behpour S, Xu M. Bandyopadhyay H, et al. Among authors: xu m. Bioinformatics. 2022 Jan 27;38(4):977-984. doi: 10.1093/bioinformatics/btab794. Bioinformatics. 2022. PMID: 34897387 Free PMC article.

2

Template-free detection of macromolecular complexes in cryo electron tomograms.

Xu M, Beck M, Alber F. Xu M, et al. Bioinformatics. 2011 Jul 1;27(13):i69-76. doi: 10.1093/bioinformatics/btr207. Bioinformatics. 2011. PMID: 21685103 Free PMC article.

3

Deep learning-based subdivision approach for large scale macromolecules structure recovery from electron cryo tomograms.

Xu M, Chai X, Muthakana H, Liang X, Yang G, Zeev-Ben-Mordehai T, Xing EP. Xu M, et al. Bioinformatics. 2017 Jul 15;33(14):i13-i22. doi: 10.1093/bioinformatics/btx230. Bioinformatics. 2017. PMID: 28881965 Free PMC article.

4

A convolutional autoencoder approach for mining features in cellular electron cryo-tomograms and weakly supervised coarse segmentation.

Zeng X, Leung MR, Zeev-Ben-Mordehai T, Xu M. Zeng X, et al. Among authors: xu m. J Struct Biol. 2018 May;202(2):150-160. doi: 10.1016/j.jsb.2017.12.015. Epub 2017 Dec 28. J Struct Biol. 2018. PMID: 29289599 Free PMC article.

5

An integration of fast alignment and maximum-likelihood methods for electron subtomogram averaging and classification.

Zhao Y, Zeng X, Guo Q, Xu M. Zhao Y, et al. Among authors: xu m. Bioinformatics. 2018 Jul 1;34(13):i227-i236. doi: 10.1093/bioinformatics/bty267. Bioinformatics. 2018. PMID: 29949977 Free PMC article.

6

Automatic localization and identification of mitochondria in cellular electron cryo-tomography using faster-RCNN.

Li R, Zeng X, Sigmund SE, Lin R, Zhou B, Liu C, Wang K, Jiang R, Freyberg Z, Lv H, Xu M. Li R, et al. Among authors: xu m. BMC Bioinformatics. 2019 Mar 29;20(Suppl 3):132. doi: 10.1186/s12859-019-2650-7. BMC Bioinformatics. 2019. PMID: 30925860 Free PMC article.

7

Feature Decomposition Based Saliency Detection in Electron Cryo-Tomograms.

Zhou B, Guo Q, Zeng X, Xu M. Zhou B, et al. Among authors: xu m. Proceedings (IEEE Int Conf Bioinformatics Biomed). 2018 Dec;2018:2467-2473. doi: 10.1109/BIBM.2018.8621363. Epub 2019 Jan 24. Proceedings (IEEE Int Conf Bioinformatics Biomed). 2018. PMID: 31205800 Free PMC article.

8

Model Compression for Faster Structural Separation of Macromolecules Captured by Cellular Electron Cryo-Tomography.

Guo J, Zhou B, Zeng X, Freyberg Z, Xu M. Guo J, et al. Among authors: xu m. Image Anal Recognit. 2018 Jun;10882:144-152. doi: 10.1007/978-3-319-93000-8_17. Epub 2018 Jun 6. Image Anal Recognit. 2018. PMID: 31231722 Free PMC article.

9

Fine-grained alignment of cryo-electron subtomograms based on MPI parallel optimization.

Lü Y, Zeng X, Zhao X, Li S, Li H, Gao X, Xu M. Lü Y, et al. Among authors: xu m. BMC Bioinformatics. 2019 Aug 28;20(1):443. doi: 10.1186/s12859-019-3003-2. BMC Bioinformatics. 2019. PMID: 31455212 Free PMC article.

10

A joint method for marker-free alignment of tilt series in electron tomography.

Han R, Bao Z, Zeng X, Niu T, Zhang F, Xu M, Gao X. Han R, et al. Among authors: xu m. Bioinformatics. 2019 Jul 15;35(14):i249-i259. doi: 10.1093/bioinformatics/btz323. Bioinformatics. 2019. PMID: 31510669 Free PMC article.

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