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A note on the false discovery rate of novel peptides in proteogenomics.
Zhang K, Fu Y, Zeng WF, He K, Chi H, Liu C, Li YC, Gao Y, Xu P, He SM. Zhang K, et al. Among authors: zeng wf. Bioinformatics. 2015 Oct 15;31(20):3249-53. doi: 10.1093/bioinformatics/btv340. Epub 2015 Jun 14. Bioinformatics. 2015. PMID: 26076724 Free PMC article.
pGlyco 2.0 enables precision N-glycoproteomics with comprehensive quality control and one-step mass spectrometry for intact glycopeptide identification.
Liu MQ, Zeng WF, Fang P, Cao WQ, Liu C, Yan GQ, Zhang Y, Peng C, Wu JQ, Zhang XJ, Tu HJ, Chi H, Sun RX, Cao Y, Dong MQ, Jiang BY, Huang JM, Shen HL, Wong CCL, He SM, Yang PY. Liu MQ, et al. Among authors: zeng wf. Nat Commun. 2017 Sep 5;8(1):438. doi: 10.1038/s41467-017-00535-2. Nat Commun. 2017. PMID: 28874712 Free PMC article.
pDeep: Predicting MS/MS Spectra of Peptides with Deep Learning.
Zhou XX, Zeng WF, Chi H, Luo C, Liu C, Zhan J, He SM, Zhang Z. Zhou XX, et al. Among authors: zeng wf. Anal Chem. 2017 Dec 5;89(23):12690-12697. doi: 10.1021/acs.analchem.7b02566. Epub 2017 Nov 21. Anal Chem. 2017. PMID: 29125736
82 results