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Class imbalance in out-of-distribution datasets: Improving the robustness of the TextCNN for the classification of rare cancer types.
De Angeli K, Gao S, Danciu I, Durbin EB, Wu XC, Stroup A, Doherty J, Schwartz S, Wiggins C, Damesyn M, Coyle L, Penberthy L, Tourassi GD, Yoon HJ. De Angeli K, et al. Among authors: penberthy l. J Biomed Inform. 2022 Jan;125:103957. doi: 10.1016/j.jbi.2021.103957. Epub 2021 Nov 22. J Biomed Inform. 2022. PMID: 34823030 Free PMC article.
Preliminary estimates of SEER cancer incidence for 2013.
Lewis DR, Chen HS, Cockburn M, Wu XC, Stroup AM, Midthune DN, Krapcho MF, Miller DG, Penberthy L, Feuer EJ. Lewis DR, et al. Among authors: penberthy l. Cancer. 2016 May 15;122(10):1579-87. doi: 10.1002/cncr.29953. Epub 2016 Mar 15. Cancer. 2016. PMID: 26991915 Free article.
Validation of prostate-specific antigen laboratory values recorded in Surveillance, Epidemiology, and End Results registries.
National Cancer Institute Surveillance, Epidemiology, and End Results Prostate-Specific Antigen Working Group; Adamo MP, Boten JA, Coyle LM, Cronin KA, Lam CJ, Negoita S, Penberthy L, Stevens JL, Ward KC. National Cancer Institute Surveillance, Epidemiology, and End Results Prostate-Specific Antigen Working Group, et al. Among authors: penberthy l. Cancer. 2017 Feb 15;123(4):697-703. doi: 10.1002/cncr.30401. Epub 2016 Oct 26. Cancer. 2017. PMID: 27783399 Free PMC article.
Breast-cancer-specific mortality in patients treated based on the 21-gene assay: a SEER population-based study.
Petkov VI, Miller DP, Howlader N, Gliner N, Howe W, Schussler N, Cronin K, Baehner FL, Cress R, Deapen D, Glaser SL, Hernandez BY, Lynch CF, Mueller L, Schwartz AG, Schwartz SM, Stroup A, Sweeney C, Tucker TC, Ward KC, Wiggins C, Wu XC, Penberthy L, Shak S. Petkov VI, et al. Among authors: penberthy l. NPJ Breast Cancer. 2016 Jun 8;2:16017. doi: 10.1038/npjbcancer.2016.17. eCollection 2016. NPJ Breast Cancer. 2016. PMID: 28721379 Free PMC article.
Erratum: Author Correction: Breast-cancer-specific mortality in patients treated based on the 21-gene assay: a SEER population-based study.
Petkov VI, Miller DP, Howlader N, Gliner N, Howe W, Schussler N, Cronin K, Baehner FL, Cress R, Deapen D, Glaser SL, Hernandez BY, Lynch CF, Mueller L, Schwartz AG, Schwartz SM, Stroup A, Sweeney C, Tucker TC, Ward KC, Wiggins C, Wu XC, Penberthy L, Shak S. Petkov VI, et al. Among authors: penberthy l. NPJ Breast Cancer. 2018 Jul 6;4:17. doi: 10.1038/s41523-018-0069-3. eCollection 2018. NPJ Breast Cancer. 2018. PMID: 30003141 Free PMC article.
AI Meets Exascale Computing: Advancing Cancer Research With Large-Scale High Performance Computing.
Bhattacharya T, Brettin T, Doroshow JH, Evrard YA, Greenspan EJ, Gryshuk AL, Hoang TT, Lauzon CBV, Nissley D, Penberthy L, Stahlberg E, Stevens R, Streitz F, Tourassi G, Xia F, Zaki G. Bhattacharya T, et al. Among authors: penberthy l. Front Oncol. 2019 Oct 2;9:984. doi: 10.3389/fonc.2019.00984. eCollection 2019. Front Oncol. 2019. PMID: 31632915 Free PMC article. Review.
Classifying cancer pathology reports with hierarchical self-attention networks.
Gao S, Qiu JX, Alawad M, Hinkle JD, Schaefferkoetter N, Yoon HJ, Christian B, Fearn PA, Penberthy L, Wu XC, Coyle L, Tourassi G, Ramanathan A. Gao S, et al. Among authors: penberthy l. Artif Intell Med. 2019 Nov;101:101726. doi: 10.1016/j.artmed.2019.101726. Epub 2019 Oct 15. Artif Intell Med. 2019. PMID: 31813492 Free article.
Using case-level context to classify cancer pathology reports.
Gao S, Alawad M, Schaefferkoetter N, Penberthy L, Wu XC, Durbin EB, Coyle L, Ramanathan A, Tourassi G. Gao S, et al. Among authors: penberthy l. PLoS One. 2020 May 12;15(5):e0232840. doi: 10.1371/journal.pone.0232840. eCollection 2020. PLoS One. 2020. PMID: 32396579 Free PMC article.
140 results