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Cell-type specialization is encoded by specific chromatin topologies.
Winick-Ng W, Kukalev A, Harabula I, Zea-Redondo L, Szabó D, Meijer M, Serebreni L, Zhang Y, Bianco S, Chiariello AM, Irastorza-Azcarate I, Thieme CJ, Sparks TM, Carvalho S, Fiorillo L, Musella F, Irani E, Torlai Triglia E, Kolodziejczyk AA, Abentung A, Apostolova G, Paul EJ, Franke V, Kempfer R, Akalin A, Teichmann SA, Dechant G, Ungless MA, Nicodemi M, Welch L, Castelo-Branco G, Pombo A. Winick-Ng W, et al. Among authors: fiorillo l. Nature. 2021 Nov;599(7886):684-691. doi: 10.1038/s41586-021-04081-2. Epub 2021 Nov 17. Nature. 2021. PMID: 34789882 Free PMC article.
Comparison of the Hi-C, GAM and SPRITE methods using polymer models of chromatin.
Fiorillo L, Musella F, Conte M, Kempfer R, Chiariello AM, Bianco S, Kukalev A, Irastorza-Azcarate I, Esposito A, Abraham A, Prisco A, Pombo A, Nicodemi M. Fiorillo L, et al. Nat Methods. 2021 May;18(5):482-490. doi: 10.1038/s41592-021-01135-1. Epub 2021 May 7. Nat Methods. 2021. PMID: 33963348 Free PMC article.
Physical mechanisms of chromatin spatial organization.
Chiariello AM, Bianco S, Esposito A, Fiorillo L, Conte M, Irani E, Musella F, Abraham A, Prisco A, Nicodemi M. Chiariello AM, et al. Among authors: fiorillo l. FEBS J. 2022 Mar;289(5):1180-1190. doi: 10.1111/febs.15762. Epub 2021 Feb 22. FEBS J. 2022. PMID: 33583147 Free article. Review.
Models of polymer physics for the architecture of the cell nucleus.
Esposito A, Annunziatella C, Bianco S, Chiariello AM, Fiorillo L, Nicodemi M. Esposito A, et al. Among authors: fiorillo l. Wiley Interdiscip Rev Syst Biol Med. 2019 Jul;11(4):e1444. doi: 10.1002/wsbm.1444. Epub 2018 Dec 19. Wiley Interdiscip Rev Syst Biol Med. 2019. PMID: 30566285 Free PMC article. Review.
241 results