Yang X - Search Results

1

Three chromosome-scale Papaver genomes reveal punctuated patchwork evolution of the morphinan and noscapine biosynthesis pathway.

Yang X, Gao S, Guo L, Wang B, Jia Y, Zhou J, Che Y, Jia P, Lin J, Xu T, Sun J, Ye K. Yang X, et al. Nat Commun. 2021 Oct 15;12(1):6030. doi: 10.1038/s41467-021-26330-8. Nat Commun. 2021. PMID: 34654815 Free PMC article.

2

Split-Read Indel and Structural Variant Calling Using PINDEL.

Ye K, Guo L, Yang X, Lamijer EW, Raine K, Ning Z. Ye K, et al. Among authors: yang x. Methods Mol Biol. 2018;1833:95-105. doi: 10.1007/978-1-4939-8666-8_7. Methods Mol Biol. 2018. PMID: 30039366

3

The opium poppy genome and morphinan production.

Guo L, Winzer T, Yang X, Li Y, Ning Z, He Z, Teodor R, Lu Y, Bowser TA, Graham IA, Ye K. Guo L, et al. Among authors: yang x. Science. 2018 Oct 19;362(6412):343-347. doi: 10.1126/science.aat4096. Epub 2018 Aug 30. Science. 2018. PMID: 30166436 Free article.

4

PVTree: A Sequential Pattern Mining Method for Alignment Independent Phylogeny Reconstruction.

Kang Y, Yang X, Lin J, Ye K. Kang Y, et al. Among authors: yang x. Genes (Basel). 2019 Jan 22;10(2):73. doi: 10.3390/genes10020073. Genes (Basel). 2019. PMID: 30678245 Free PMC article.

5

One reference genome is not enough.

Yang X, Lee WP, Ye K, Lee C. Yang X, et al. Genome Biol. 2019 May 24;20(1):104. doi: 10.1186/s13059-019-1717-0. Genome Biol. 2019. PMID: 31126314 Free PMC article.

6

MEpurity: estimating tumor purity using DNA methylation data.

Liu B, Yang X, Wang T, Lin J, Kang Y, Jia P, Ye K. Liu B, et al. Among authors: yang x. Bioinformatics. 2019 Dec 15;35(24):5298-5300. doi: 10.1093/bioinformatics/btz555. Bioinformatics. 2019. PMID: 31297508

7

MSIsensor-pro: Fast, Accurate, and Matched-normal-sample-free Detection of Microsatellite Instability.

Jia P, Yang X, Guo L, Liu B, Lin J, Liang H, Sun J, Zhang C, Ye K. Jia P, et al. Among authors: yang x. Genomics Proteomics Bioinformatics. 2020 Feb;18(1):65-71. doi: 10.1016/j.gpb.2020.02.001. Epub 2020 Mar 12. Genomics Proteomics Bioinformatics. 2020. PMID: 32171661 Free PMC article.

8

Transportation, germs, culture: a dynamic graph model of COVID-19 outbreak.

Yang X, Xu T, Jia P, Xia H, Guo L, Zhang L, Ye K. Yang X, et al. Quant Biol. 2020;8(3):238-244. doi: 10.1007/s40484-020-0215-4. Epub 2020 Sep 9. Quant Biol. 2020. PMID: 32923014 Free PMC article.

9

gCAnno: a graph-based single cell type annotation method.

Yang X, Gao S, Wang T, Yang B, Dang N, Ye K. Yang X, et al. Among authors: yang b. BMC Genomics. 2020 Nov 23;21(1):823. doi: 10.1186/s12864-020-07223-4. BMC Genomics. 2020. PMID: 33228535 Free PMC article.

10

Predicting the early risk of ophthalmopathy in Graves' disease patients using TCR repertoire.

Wang Y, Liu Y, Yang X, Guo H, Lin J, Yang J, He M, Wang J, Liu X, Shi T, Wu L, Zhang C, Ye K, Shi B. Wang Y, et al. Among authors: yang x, yang j. Clin Transl Med. 2020 Nov;10(7):e218. doi: 10.1002/ctm2.218. Clin Transl Med. 2020. PMID: 33252854 Free PMC article. No abstract available.

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