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Chromosome-scale assembly and whole-genome sequencing of 266 giant panda roundworms provide insights into their evolution, adaptation and potential drug targets.
Han L, Lan T, Li D, Li H, Deng L, Peng Z, He S, Zhou Y, Han R, Li L, Lu Y, Lu H, Wang Q, Yang S, Zhu Y, Huang Y, Cheng X, Yu J, Wang Y, Sun H, Chai H, Yang H, Xu X, Lisby M, Liu Q, Kristiansen K, Liu H, Hou Z. Han L, et al. Among authors: lu y, lu h. Mol Ecol Resour. 2022 Feb;22(2):768-785. doi: 10.1111/1755-0998.13504. Epub 2021 Oct 28. Mol Ecol Resour. 2022. PMID: 34549895 Free PMC article.
Assessment of the cPAS-based BGISEQ-500 platform for metagenomic sequencing.
Fang C, Zhong H, Lin Y, Chen B, Han M, Ren H, Lu H, Luber JM, Xia M, Li W, Stein S, Xu X, Zhang W, Drmanac R, Wang J, Yang H, Hammarström L, Kostic AD, Kristiansen K, Li J. Fang C, et al. Among authors: lu h. Gigascience. 2018 Mar 1;7(3):1-8. doi: 10.1093/gigascience/gix133. Gigascience. 2018. PMID: 29293960 Free PMC article.
Whole-genome sequencing of 175 Mongolians uncovers population-specific genetic architecture and gene flow throughout North and East Asia.
Bai H, Guo X, Narisu N, Lan T, Wu Q, Xing Y, Zhang Y, Bond SR, Pei Z, Zhang Y, Zhang D, Jirimutu J, Zhang D, Yang X, Morigenbatu M, Zhang L, Ding B, Guan B, Cao J, Lu H, Liu Y, Li W, Dang N, Jiang M, Wang S, Xu H, Wang D, Liu C, Luo X, Gao Y, Li X, Wu Z, Yang L, Meng F, Ning X, Hashenqimuge H, Wu K, Wang B, Suyalatu S, Liu Y, Ye C, Wu H, Leppälä K, Li L, Fang L, Chen Y, Xu W, Li T, Liu X, Xu X, Gignoux CR, Yang H, Brody LC, Wang J, Kristiansen K, Burenbatu B, Zhou H, Yin Y. Bai H, et al. Among authors: lu h. Nat Genet. 2018 Dec;50(12):1696-1704. doi: 10.1038/s41588-018-0250-5. Epub 2018 Nov 5. Nat Genet. 2018. PMID: 30397334
The first chromosome-level genome for a marine mammal as a resource to study ecology and evolution.
Fan G, Zhang Y, Liu X, Wang J, Sun Z, Sun S, Zhang H, Chen J, Lv M, Han K, Tan X, Hu J, Guan R, Fu Y, Liu S, Chen X, Xu Q, Qin Y, Liu L, Bai J, Wang O, Tang J, Lu H, Shang Z, Wang B, Hu G, Zhao X, Zou Y, Chen A, Gong M, Zhang W, Lee SM, Li S, Liu J, Li Z, Lu Y, Sabir JSM, Sabir MJ, Khan M, Hajrah NH, Yin Y, Kristiansen K, Yang H, Wang J, Xu X, Liu X. Fan G, et al. Among authors: lu y, lu h. Mol Ecol Resour. 2019 Jul;19(4):944-956. doi: 10.1111/1755-0998.13003. Epub 2019 May 9. Mol Ecol Resour. 2019. PMID: 30735609
Genomic and transcriptomic analysis unveils population evolution and development of pesticide resistance in fall armyworm Spodoptera frugiperda.
Gui F, Lan T, Zhao Y, Guo W, Dong Y, Fang D, Liu H, Li H, Wang H, Hao R, Cheng X, Li Y, Yang P, Sahu SK, Chen Y, Cheng L, He S, Liu P, Fan G, Lu H, Hu G, Dong W, Chen B, Jiang Y, Zhang Y, Xu H, Lin F, Slippers B, Postma A, Jackson M, Abate BA, Tesfaye K, Demie AL, Bayeleygne MD, Degefu DT, Chen F, Kuria PK, Kinyua ZM, Liu TX, Yang H, Huang F, Liu X, Sheng J, Kang L. Gui F, et al. Among authors: lu h. Protein Cell. 2022 Jul;13(7):513-531. doi: 10.1007/s13238-020-00795-7. Epub 2020 Oct 27. Protein Cell. 2022. PMID: 33108584 Free PMC article.
Whole-genome resequencing of 445 Lactuca accessions reveals the domestication history of cultivated lettuce.
Wei T, van Treuren R, Liu X, Zhang Z, Chen J, Liu Y, Dong S, Sun P, Yang T, Lan T, Wang X, Xiong Z, Liu Y, Wei J, Lu H, Han S, Chen JC, Ni X, Wang J, Yang H, Xu X, Kuang H, van Hintum T, Liu X, Liu H. Wei T, et al. Among authors: lu h. Nat Genet. 2021 May;53(5):752-760. doi: 10.1038/s41588-021-00831-0. Epub 2021 Apr 12. Nat Genet. 2021. PMID: 33846635
Life History Recorded in the Vagino-cervical Microbiome Along with Multi-omes.
Jie Z, Chen C, Hao L, Li F, Song L, Zhang X, Zhu J, Tian L, Tong X, Cai K, Zhang Z, Ju Y, Yu X, Li Y, Zhou H, Lu H, Qiu X, Li Q, Liao Y, Zhou D, Lian H, Zuo Y, Chen X, Rao W, Ren Y, Wang Y, Zi J, Wang R, Liu N, Wu J, Zhang W, Liu X, Zong Y, Liu W, Xiao L, Hou Y, Xu X, Yang H, Wang J, Kristiansen K, Jia H. Jie Z, et al. Among authors: lu h. Genomics Proteomics Bioinformatics. 2022 Apr;20(2):304-321. doi: 10.1016/j.gpb.2021.01.005. Epub 2021 Jun 9. Genomics Proteomics Bioinformatics. 2022. PMID: 34118463 Free PMC article.
Single cell atlas for 11 non-model mammals, reptiles and birds.
Chen D, Sun J, Zhu J, Ding X, Lan T, Wang X, Wu W, Ou Z, Zhu L, Ding P, Wang H, Luo L, Xiang R, Wang X, Qiu J, Wang S, Li H, Chai C, Liang L, An F, Zhang L, Han L, Zhu Y, Wang F, Yuan Y, Wu W, Sun C, Lu H, Wu J, Sun X, Zhang S, Sahu SK, Liu P, Xia J, Zhang L, Chen H, Fang D, Zeng Y, Wu Y, Cui Z, He Q, Jiang S, Ma X, Feng W, Xu Y, Li F, Liu Z, Chen L, Chen F, Jin X, Qiu W, Wang T, Li Y, Xing X, Yang H, Xu Y, Hua Y, Liu Y, Liu H, Xu X. Chen D, et al. Among authors: lu h. Nat Commun. 2021 Dec 6;12(1):7083. doi: 10.1038/s41467-021-27162-2. Nat Commun. 2021. PMID: 34873160 Free PMC article.
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