Kim SK - Search Results

1

Structures and Agonist Binding Sites of Bitter Taste Receptor TAS2R5 Complexed with Gi Protein and Validated against Experiment.

Yang MY, Kim SK, Kim D, Liggett SB, Goddard WA 3rd. Yang MY, et al. Among authors: kim d, kim sk. J Phys Chem Lett. 2021 Sep 30;12(38):9293-9300. doi: 10.1021/acs.jpclett.1c02162. Epub 2021 Sep 20. J Phys Chem Lett. 2021. PMID: 34542294 Free PMC article.

2

Predicted 3D structures for adenosine receptors bound to ligands: comparison to the crystal structure.

Goddard WA 3rd, Kim SK, Li Y, Trzaskowski B, Griffith AR, Abrol R. Goddard WA 3rd, et al. Among authors: kim sk. J Struct Biol. 2010 Apr;170(1):10-20. doi: 10.1016/j.jsb.2010.01.001. Epub 2010 Jan 15. J Struct Biol. 2010. PMID: 20079848 Free article.

3

Prediction of the three-dimensional structure for the rat urotensin II receptor, and comparison of the antagonist binding sites and binding selectivity between human and rat receptors from atomistic simulations.

Kim SK, Li Y, Park C, Abrol R, Goddard WA 3rd. Kim SK, et al. ChemMedChem. 2010 Sep 3;5(9):1594-608. doi: 10.1002/cmdc.201000175. ChemMedChem. 2010. PMID: 20683923 Free PMC article.

4

Predicted structures and dynamics for agonists and antagonists bound to serotonin 5-HT2B and 5-HT2C receptors.

Kim SK, Li Y, Abrol R, Heo J, Goddard WA 3rd. Kim SK, et al. J Chem Inf Model. 2011 Feb 28;51(2):420-33. doi: 10.1021/ci100375b. Epub 2011 Feb 7. J Chem Inf Model. 2011. PMID: 21299232 Free PMC article.

5

Predicted structures of agonist and antagonist bound complexes of adenosine A3 receptor.

Kim SK, Riley L, Abrol R, Jacobson KA, Goddard WA 3rd. Kim SK, et al. Proteins. 2011 Jun;79(6):1878-97. doi: 10.1002/prot.23012. Epub 2011 Apr 12. Proteins. 2011. PMID: 21488099 Free PMC article.

6

Structure-based prediction of subtype selectivity of histamine H3 receptor selective antagonists in clinical trials.

Kim SK, Fristrup P, Abrol R, Goddard WA 3rd. Kim SK, et al. J Chem Inf Model. 2011 Dec 27;51(12):3262-74. doi: 10.1021/ci200435b. Epub 2011 Nov 16. J Chem Inf Model. 2011. PMID: 22035233 Free PMC article.

7

Characterizing and predicting the functional and conformational diversity of seven-transmembrane proteins.

Abrol R, Kim SK, Bray JK, Griffith AR, Goddard WA 3rd. Abrol R, et al. Among authors: kim sk. Methods. 2011 Dec;55(4):405-14. doi: 10.1016/j.ymeth.2011.12.005. Epub 2011 Dec 17. Methods. 2011. PMID: 22197575 Free PMC article.

8

How broadly tuned olfactory receptors equally recognize their agonists. Human OR1G1 as a test case.

Charlier L, Topin J, Ronin C, Kim SK, Goddard WA 3rd, Efremov R, Golebiowski J. Charlier L, et al. Among authors: kim sk. Cell Mol Life Sci. 2012 Dec;69(24):4205-13. doi: 10.1007/s00018-012-1116-0. Epub 2012 Aug 29. Cell Mol Life Sci. 2012. PMID: 22926438 Free PMC article.

9

Conformational ensemble view of G protein-coupled receptors and the effect of mutations and ligand binding.

Abrol R, Kim SK, Bray JK, Trzaskowski B, Goddard WA 3rd. Abrol R, et al. Among authors: kim sk. Methods Enzymol. 2013;520:31-48. doi: 10.1016/B978-0-12-391861-1.00002-2. Methods Enzymol. 2013. PMID: 23332694

10

Predicted ligands for the human urotensin-II G protein-coupled receptor with some experimental validation.

Kim SK, Goddard WA 3rd, Yi KY, Lee BH, Lim CJ, Trzaskowski B. Kim SK, et al. ChemMedChem. 2014 Aug;9(8):1732-43. doi: 10.1002/cmdc.201402087. Epub 2014 Jul 2. ChemMedChem. 2014. PMID: 24989481

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