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Eliminating accidental deviations to minimize generalization error and maximize replicability: Applications in connectomics and genomics.
Bridgeford EW, Wang S, Wang Z, Xu T, Craddock C, Dey J, Kiar G, Gray-Roncal W, Colantuoni C, Douville C, Noble S, Priebe CE, Caffo B, Milham M, Zuo XN; Consortium for Reliability and Reproducibility; Vogelstein JT. Bridgeford EW, et al. Among authors: colantuoni c. PLoS Comput Biol. 2021 Sep 16;17(9):e1009279. doi: 10.1371/journal.pcbi.1009279. eCollection 2021 Sep. PLoS Comput Biol. 2021. PMID: 34529652 Free PMC article.
A Curated Compendium of Transcriptomic Data for the Exploration of Neocortical Development.
Sonthalia S, Adkins RS, Orvis J, Li G, Mato Blanco X, Casella A, Liu J, Stein-O'Brien G, Caffo B, Hertzano R, Mahurkar A, Gillis J, Werner J, Ma S, Micali N, Sestan N, Rakic P, Santpere G, Ament SA, Colantuoni C. Sonthalia S, et al. Among authors: colantuoni c. bioRxiv [Preprint]. 2024 Aug 7:2024.02.26.581612. doi: 10.1101/2024.02.26.581612. bioRxiv. 2024. PMID: 38464021 Free PMC article. Preprint.
PatternMarkers & GWCoGAPS for novel data-driven biomarkers via whole transcriptome NMF.
Stein-O'Brien GL, Carey JL, Lee WS, Considine M, Favorov AV, Flam E, Guo T, Li S, Marchionni L, Sherman T, Sivy S, Gaykalova DA, McKay RD, Ochs MF, Colantuoni C, Fertig EJ. Stein-O'Brien GL, et al. Among authors: colantuoni c. Bioinformatics. 2017 Jun 15;33(12):1892-1894. doi: 10.1093/bioinformatics/btx058. Bioinformatics. 2017. PMID: 28174896 Free PMC article.
66 results