Qi R - Search Results

1

Heparin remodels the microtubule-binding repeat R3 of Tau protein towards fibril-prone conformations.

Dong X, Qi R, Qiao Q, Li X, Li F, Wan J, Zhang Q, Wei G. Dong X, et al. Among authors: qi r. Phys Chem Chem Phys. 2021 Sep 22;23(36):20406-20418. doi: 10.1039/d1cp02651h. Phys Chem Chem Phys. 2021. PMID: 34494046

2

Conformational distribution and α-helix to β-sheet transition of human amylin fragment dimer.

Qi R, Luo Y, Ma B, Nussinov R, Wei G. Qi R, et al. Biomacromolecules. 2014 Jan 13;15(1):122-31. doi: 10.1021/bm401406e. Epub 2013 Dec 16. Biomacromolecules. 2014. PMID: 24313776 Free PMC article.

3

Effects of the C-Terminal Tail on the Conformational Dynamics of Human Neuronal Calcium Sensor-1 Protein.

Zhu Y, Yang S, Qi R, Zou Y, Ma B, Nussinov R, Zhang Q. Zhu Y, et al. Among authors: qi r. J Phys Chem B. 2015 Nov 5;119(44):14236-44. doi: 10.1021/acs.jpcb.5b07962. Epub 2015 Oct 16. J Phys Chem B. 2015. PMID: 26447771 Free PMC article.

4

Self-aggregation and coaggregation of the p53 core fragment with its aggregation gatekeeper variant.

Lei J, Qi R, Wei G, Nussinov R, Ma B. Lei J, et al. Among authors: qi r. Phys Chem Chem Phys. 2016 Mar 21;18(11):8098-107. doi: 10.1039/c5cp06538k. Phys Chem Chem Phys. 2016. PMID: 26923710 Free PMC article.

5

Temperature-Dependent Conformational Properties of Human Neuronal Calcium Sensor-1 Protein Revealed by All-Atom Simulations.

Zhu Y, Ma B, Qi R, Nussinov R, Zhang Q. Zhu Y, et al. Among authors: qi r. J Phys Chem B. 2016 Apr 14;120(14):3551-9. doi: 10.1021/acs.jpcb.5b12299. Epub 2016 Mar 31. J Phys Chem B. 2016. PMID: 27007011 Free PMC article.

6

Interaction Dynamics in Inhibiting the Aggregation of Aβ Peptides by SWCNTs: A Combined Experimental and Coarse-Grained Molecular Dynamic Simulation Study.

Lin D, Qi R, Li S, He R, Li P, Wei G, Yang X. Lin D, et al. Among authors: qi r. ACS Chem Neurosci. 2016 Sep 21;7(9):1232-40. doi: 10.1021/acschemneuro.6b00101. Epub 2016 Aug 3. ACS Chem Neurosci. 2016. PMID: 27441457

7

Conformational dynamics of cancer-associated MyD88-TIR domain mutant L252P (L265P) allosterically tilts the landscape toward homo-dimerization.

Zhan C, Qi R, Wei G, Guven-Maiorov E, Nussinov R, Ma B. Zhan C, et al. Among authors: qi r. Protein Eng Des Sel. 2016 Sep;29(9):347-54. doi: 10.1093/protein/gzw033. Epub 2016 Aug 8. Protein Eng Des Sel. 2016. PMID: 27503954 Free PMC article.

8

Expanding the Nanoarchitectural Diversity Through Aromatic Di- and Tri-Peptide Coassembly: Nanostructures and Molecular Mechanisms.

Guo C, Arnon ZA, Qi R, Zhang Q, Adler-Abramovich L, Gazit E, Wei G. Guo C, et al. Among authors: qi r. ACS Nano. 2016 Sep 27;10(9):8316-24. doi: 10.1021/acsnano.6b02739. Epub 2016 Aug 26. ACS Nano. 2016. PMID: 27548765

9

Dynamics of the conformational transitions during the dimerization of an intrinsically disordered peptide: a case study on the human islet amyloid polypeptide fragment.

Qiao Q, Qi R, Wei G, Huang X. Qiao Q, et al. Among authors: qi r. Phys Chem Chem Phys. 2016 Nov 2;18(43):29892-29904. doi: 10.1039/c6cp05590g. Phys Chem Chem Phys. 2016. PMID: 27759128

10

Replica Exchange Molecular Dynamics: A Practical Application Protocol with Solutions to Common Problems and a Peptide Aggregation and Self-Assembly Example.

Qi R, Wei G, Ma B, Nussinov R. Qi R, et al. Methods Mol Biol. 2018;1777:101-119. doi: 10.1007/978-1-4939-7811-3_5. Methods Mol Biol. 2018. PMID: 29744830 Free PMC article.

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