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Quantification of the spread of SARS-CoV-2 variant B.1.1.7 in Switzerland.
Chen C, Nadeau SA, Topolsky I, Manceau M, Huisman JS, Jablonski KP, Fuhrmann L, Dreifuss D, Jahn K, Beckmann C, Redondo M, Noppen C, Risch L, Risch M, Wohlwend N, Kas S, Bodmer T, Roloff T, Stange M, Egli A, Eckerle I, Kaiser L, Denes R, Feldkamp M, Nissen I, Santacroce N, Burcklen E, Aquino C, de Gouvea AC, Moccia MD, Grüter S, Sykes T, Opitz L, White G, Neff L, Popovic D, Patrignani A, Tracy J, Schlapbach R, Dermitzakis ET, Harshman K, Xenarios I, Pegeot H, Cerutti L, Penet D, Blin A, Elies M, Althaus CL, Beisel C, Beerenwinkel N, Ackermann M, Stadler T. Chen C, et al. Among authors: jahn k. Epidemics. 2021 Dec;37:100480. doi: 10.1016/j.epidem.2021.100480. Epub 2021 Aug 9. Epidemics. 2021. PMID: 34488035 Free PMC article.
Tree inference for single-cell data.
Jahn K, Kuipers J, Beerenwinkel N. Jahn K, et al. Genome Biol. 2016 May 5;17:86. doi: 10.1186/s13059-016-0936-x. Genome Biol. 2016. PMID: 27149953 Free PMC article.
Advances in understanding tumour evolution through single-cell sequencing.
Kuipers J, Jahn K, Beerenwinkel N. Kuipers J, et al. Among authors: jahn k. Biochim Biophys Acta Rev Cancer. 2017 Apr;1867(2):127-138. doi: 10.1016/j.bbcan.2017.02.001. Epub 2017 Feb 11. Biochim Biophys Acta Rev Cancer. 2017. PMID: 28193548 Free PMC article. Review.
The Bourque distances for mutation trees of cancers.
Jahn K, Beerenwinkel N, Zhang L. Jahn K, et al. Algorithms Mol Biol. 2021 Jun 10;16(1):9. doi: 10.1186/s13015-021-00188-3. Algorithms Mol Biol. 2021. PMID: 34112201 Free PMC article.
Statistical tests for intra-tumour clonal co-occurrence and exclusivity.
Kuipers J, Moore AL, Jahn K, Schraml P, Wang F, Morita K, Futreal PA, Takahashi K, Beisel C, Moch H, Beerenwinkel N. Kuipers J, et al. Among authors: jahn k. PLoS Comput Biol. 2021 Dec 15;17(12):e1009036. doi: 10.1371/journal.pcbi.1009036. eCollection 2021 Dec. PLoS Comput Biol. 2021. PMID: 34910733 Free PMC article.
586 results