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HiCNorm: removing biases in Hi-C data via Poisson regression.
Hu M, Deng K, Selvaraj S, Qin Z, Ren B, Liu JS. Hu M, et al. Bioinformatics. 2012 Dec 1;28(23):3131-3. doi: 10.1093/bioinformatics/bts570. Epub 2012 Sep 27. Bioinformatics. 2012. PMID: 23023982 Free PMC article.
Bayesian inference of spatial organizations of chromosomes.
Hu M, Deng K, Qin Z, Dixon J, Selvaraj S, Fang J, Ren B, Liu JS. Hu M, et al. PLoS Comput Biol. 2013;9(1):e1002893. doi: 10.1371/journal.pcbi.1002893. Epub 2013 Jan 31. PLoS Comput Biol. 2013. PMID: 23382666 Free PMC article.
Genome-wide mapping and analysis of chromosome architecture.
Schmitt AD, Hu M, Ren B. Schmitt AD, et al. Among authors: hu m. Nat Rev Mol Cell Biol. 2016 Dec;17(12):743-755. doi: 10.1038/nrm.2016.104. Epub 2016 Sep 1. Nat Rev Mol Cell Biol. 2016. PMID: 27580841 Free PMC article. Review.
HUGIn: Hi-C Unifying Genomic Interrogator.
Martin JS, Xu Z, Reiner AP, Mohlke KL, Sullivan P, Ren B, Hu M, Li Y. Martin JS, et al. Among authors: hu m. Bioinformatics. 2017 Dec 1;33(23):3793-3795. doi: 10.1093/bioinformatics/btx359. Bioinformatics. 2017. PMID: 28582503 Free PMC article.
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