Kaake RM - Search Results

1

Characterization of an A3G-Vif_HIV-1-CRL5-CBFβ Structure Using a Cross-linking Mass Spectrometry Pipeline for Integrative Modeling of Host-Pathogen Complexes.

Kaake RM, Echeverria I, Kim SJ, Von Dollen J, Chesarino NM, Feng Y, Yu C, Ta H, Chelico L, Huang L, Gross J, Sali A, Krogan NJ. Kaake RM, et al. Mol Cell Proteomics. 2021;20:100132. doi: 10.1016/j.mcpro.2021.100132. Epub 2021 Aug 11. Mol Cell Proteomics. 2021. PMID: 34389466 Free PMC article.

2

Characterization of cell cycle specific protein interaction networks of the yeast 26S proteasome complex by the QTAX strategy.

Kaake RM, Milenković T, Przulj N, Kaiser P, Huang L. Kaake RM, et al. J Proteome Res. 2010 Apr 5;9(4):2016-29. doi: 10.1021/pr1000175. J Proteome Res. 2010. PMID: 20170199 Free PMC article.

3

Profiling of protein interaction networks of protein complexes using affinity purification and quantitative mass spectrometry.

Kaake RM, Wang X, Huang L. Kaake RM, et al. Mol Cell Proteomics. 2010 Aug;9(8):1650-65. doi: 10.1074/mcp.R110.000265. Epub 2010 May 5. Mol Cell Proteomics. 2010. PMID: 20445003 Free PMC article. Review.

4

Selective enrichment and identification of azide-tagged cross-linked peptides using chemical ligation and mass spectrometry.

Vellucci D, Kao A, Kaake RM, Rychnovsky SD, Huang L. Vellucci D, et al. Among authors: kaake rm. J Am Soc Mass Spectrom. 2010 Aug;21(8):1432-45. doi: 10.1016/j.jasms.2010.04.004. Epub 2010 Apr 24. J Am Soc Mass Spectrom. 2010. PMID: 20472459 Free PMC article.

5

Oxidative stress-mediated regulation of proteasome complexes.

Aiken CT, Kaake RM, Wang X, Huang L. Aiken CT, et al. Among authors: kaake rm. Mol Cell Proteomics. 2011 May;10(5):R110.006924. doi: 10.1074/mcp.M110.006924. Mol Cell Proteomics. 2011. PMID: 21543789 Free PMC article. Review.

6

Mapping the protein interaction network of the human COP9 signalosome complex using a label-free QTAX strategy.

Fang L, Kaake RM, Patel VR, Yang Y, Baldi P, Huang L. Fang L, et al. Among authors: kaake rm. Mol Cell Proteomics. 2012 May;11(5):138-47. doi: 10.1074/mcp.M111.016352. Epub 2012 Apr 3. Mol Cell Proteomics. 2012. PMID: 22474085 Free PMC article.

7

Signal-induced disassembly of the SCF ubiquitin ligase complex by Cdc48/p97.

Yen JL, Flick K, Papagiannis CV, Mathur R, Tyrrell A, Ouni I, Kaake RM, Huang L, Kaiser P. Yen JL, et al. Among authors: kaake rm. Mol Cell. 2012 Oct 26;48(2):288-97. doi: 10.1016/j.molcel.2012.08.015. Epub 2012 Sep 20. Mol Cell. 2012. PMID: 23000173 Free PMC article.

8

Combining docking site and phosphosite predictions to find new substrates: identification of smoothelin-like-2 (SMTNL2) as a c-Jun N-terminal kinase (JNK) substrate.

Gordon EA, Whisenant TC, Zeller M, Kaake RM, Gordon WM, Krotee P, Patel V, Huang L, Baldi P, Bardwell L. Gordon EA, et al. Among authors: kaake rm. Cell Signal. 2013 Dec;25(12):2518-29. doi: 10.1016/j.cellsig.2013.08.004. Epub 2013 Aug 24. Cell Signal. 2013. PMID: 23981301 Free PMC article.

9

Characterizing the dynamics of proteasome complexes by proteomics approaches.

Kaake RM, Kao A, Yu C, Huang L. Kaake RM, et al. Antioxid Redox Signal. 2014 Dec 10;21(17):2444-56. doi: 10.1089/ars.2013.5815. Epub 2014 Mar 27. Antioxid Redox Signal. 2014. PMID: 24423446 Free PMC article. Review.

10

RNA binding and core complexes constitute the U-insertion/deletion editosome.

Aphasizheva I, Zhang L, Wang X, Kaake RM, Huang L, Monti S, Aphasizhev R. Aphasizheva I, et al. Among authors: kaake rm. Mol Cell Biol. 2014 Dec 1;34(23):4329-42. doi: 10.1128/MCB.01075-14. Epub 2014 Sep 15. Mol Cell Biol. 2014. PMID: 25225332 Free PMC article.

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