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Genomic epidemiology of SARS-CoV-2 in a UK university identifies dynamics of transmission.
Aggarwal D, Warne B, Jahun AS, Hamilton WL, Fieldman T, du Plessis L, Hill V, Blane B, Watkins E, Wright E, Hall G, Ludden C, Myers R, Hosmillo M, Chaudhry Y, Pinckert ML, Georgana I, Izuagbe R, Leek D, Nsonwu O, Hughes GJ, Packer S, Page AJ, Metaxaki M, Fuller S, Weale G, Holgate J, Brown CA; Cambridge Covid-19 testing Centre; University of Cambridge Asymptomatic COVID-19 Screening Programme Consortium; COVID-19 Genomics UK (COG-UK) Consortium; Howes R, McFarlane D, Dougan G, Pybus OG, Angelis D, Maxwell PH, Peacock SJ, Weekes MP, Illingworth C, Harrison EM, Matheson NJ, Goodfellow IG. Aggarwal D, et al. Nat Commun. 2022 Feb 8;13(1):751. doi: 10.1038/s41467-021-27942-w. Nat Commun. 2022. PMID: 35136068 Free PMC article.
Genomic epidemiology of SARS-CoV-2 in a university outbreak setting and implications for public health planning.
Nickbakhsh S, Hughes J, Christofidis N, Griffiths E, Shaaban S, Enright J, Smollett K, Nomikou K, Palmalux N, Tong L, Carmichael S, Sreenu VB, Orton R, Goldstein EJ, Tomb RM; COVID-19 Genomics UK (COG-UK) Consortium; Templeton K, Gunson RN, da Silva Filipe A, Milosevic C, Thomson E, Robertson DL, Holden MTG, Illingworth CJR, Smith-Palmer A. Nickbakhsh S, et al. Among authors: enright j. Sci Rep. 2022 Jul 19;12(1):11735. doi: 10.1038/s41598-022-15661-1. Sci Rep. 2022. PMID: 35853960 Free PMC article.
SCoVMod - a spatially explicit mobility and deprivation adjusted model of first wave COVID-19 transmission dynamics.
Banks CJ, Colman E, Doherty T, Tearne O, Arnold M, Atkins KE, Balaz D, Beaunée G, Bessell PR, Enright J, Kleczkowski A, Rossi G, Ruget AS, Kao RR. Banks CJ, et al. Among authors: enright j. Wellcome Open Res. 2022 May 26;7:161. doi: 10.12688/wellcomeopenres.17716.1. eCollection 2022. Wellcome Open Res. 2022. PMID: 35865220 Free PMC article.
FAIR data pipeline: provenance-driven data management for traceable scientific workflows.
Mitchell SN, Lahiff A, Cummings N, Hollocombe J, Boskamp B, Field R, Reddyhoff D, Zarebski K, Wilson A, Viola B, Burke M, Archibald B, Bessell P, Blackwell R, Boden LA, Brett A, Brett S, Dundas R, Enright J, Gonzalez-Beltran AN, Harris C, Hinder I, David Hughes C, Knight M, Mano V, McMonagle C, Mellor D, Mohr S, Marion G, Matthews L, McKendrick IJ, Mark Pooley C, Porphyre T, Reeves A, Townsend E, Turner R, Walton J, Reeve R. Mitchell SN, et al. Among authors: enright j. Philos Trans A Math Phys Eng Sci. 2022 Oct 3;380(2233):20210300. doi: 10.1098/rsta.2021.0300. Epub 2022 Aug 15. Philos Trans A Math Phys Eng Sci. 2022. PMID: 35965468 Free PMC article.
Visualization for epidemiological modelling: challenges, solutions, reflections and recommendations.
Dykes J, Abdul-Rahman A, Archambault D, Bach B, Borgo R, Chen M, Enright J, Fang H, Firat EE, Freeman E, Gönen T, Harris C, Jianu R, John NW, Khan S, Lahiff A, Laramee RS, Matthews L, Mohr S, Nguyen PH, Rahat AAM, Reeve R, Ritsos PD, Roberts JC, Slingsby A, Swallow B, Torsney-Weir T, Turkay C, Turner R, Vidal FP, Wang Q, Wood J, Xu K. Dykes J, et al. Among authors: enright j. Philos Trans A Math Phys Eng Sci. 2022 Oct 3;380(2233):20210299. doi: 10.1098/rsta.2021.0299. Epub 2022 Aug 15. Philos Trans A Math Phys Eng Sci. 2022. PMID: 35965467 Free PMC article.
Epidemics on dynamic networks.
Enright J, Kao RR. Enright J, et al. Epidemics. 2018 Sep;24:88-97. doi: 10.1016/j.epidem.2018.04.003. Epub 2018 Apr 28. Epidemics. 2018. PMID: 29907403 Free article. Review.
149 results