Jen CH - Search Results

1

Arabidopsis Coexpression Tool: a tool for gene coexpression analysis in Arabidopsis thaliana.

Zogopoulos VL, Saxami G, Malatras A, Angelopoulou A, Jen CH, Duddy WJ, Daras G, Hatzopoulos P, Westhead DR, Michalopoulos I. Zogopoulos VL, et al. Among authors: jen ch. iScience. 2021 Jul 10;24(8):102848. doi: 10.1016/j.isci.2021.102848. eCollection 2021 Aug 20. iScience. 2021. PMID: 34381973 Free PMC article.

2

Natural antisense transcripts with coding capacity in Arabidopsis may have a regulatory role that is not linked to double-stranded RNA degradation.

Jen CH, Michalopoulos I, Westhead DR, Meyer P. Jen CH, et al. Genome Biol. 2005;6(6):R51. doi: 10.1186/gb-2005-6-6-r51. Epub 2005 Jun 1. Genome Biol. 2005. PMID: 15960803 Free PMC article.

3

The Arabidopsis co-expression tool (ACT): a WWW-based tool and database for microarray-based gene expression analysis.

Jen CH, Manfield IW, Michalopoulos I, Pinney JW, Willats WG, Gilmartin PM, Westhead DR. Jen CH, et al. Plant J. 2006 Apr;46(2):336-48. doi: 10.1111/j.1365-313X.2006.02681.x. Plant J. 2006. PMID: 16623895 Free article.

4

Arabidopsis Co-expression Tool (ACT): web server tools for microarray-based gene expression analysis.

Manfield IW, Jen CH, Pinney JW, Michalopoulos I, Bradford JR, Gilmartin PM, Westhead DR. Manfield IW, et al. Among authors: jen ch. Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W504-9. doi: 10.1093/nar/gkl204. Nucleic Acids Res. 2006. PMID: 16845059 Free PMC article.

5

Conservation, convergence, and divergence of light-responsive, circadian-regulated, and tissue-specific expression patterns during evolution of the Arabidopsis GATA gene family.

Manfield IW, Devlin PF, Jen CH, Westhead DR, Gilmartin PM. Manfield IW, et al. Among authors: jen ch. Plant Physiol. 2007 Feb;143(2):941-58. doi: 10.1104/pp.106.090761. Epub 2007 Jan 5. Plant Physiol. 2007. PMID: 17208962 Free PMC article.

6

A novel regulatory event-based gene set analysis method for exploring global functional changes in heterogeneous genomic data sets.

Tung CY, Jen CH, Hsu MT, Wang HW, Lin CH. Tung CY, et al. Among authors: jen ch. BMC Genomics. 2009 Jan 16;10:26. doi: 10.1186/1471-2164-10-26. BMC Genomics. 2009. PMID: 19146704 Free PMC article.

7

easyExon--a Java-based GUI tool for processing and visualization of Affymetrix exon array data.

Chang TY, Li YY, Jen CH, Yang TP, Lin CH, Hsu MT, Wang HW. Chang TY, et al. Among authors: jen ch. BMC Bioinformatics. 2008 Oct 14;9:432. doi: 10.1186/1471-2105-9-432. BMC Bioinformatics. 2008. PMID: 18851762 Free PMC article.

8

Signature Evaluation Tool (SET): a Java-based tool to evaluate and visualize the sample discrimination abilities of gene expression signatures.

Jen CH, Yang TP, Tung CY, Su SH, Lin CH, Hsu MT, Wang HW. Jen CH, et al. BMC Bioinformatics. 2008 Jan 28;9:58. doi: 10.1186/1471-2105-9-58. BMC Bioinformatics. 2008. PMID: 18221568 Free PMC article.

9

A pattern recognition approach to infer time-lagged genetic interactions.

Chuang CL, Jen CH, Chen CM, Shieh GS. Chuang CL, et al. Among authors: jen ch. Bioinformatics. 2008 May 1;24(9):1183-90. doi: 10.1093/bioinformatics/btn098. Epub 2008 Mar 12. Bioinformatics. 2008. PMID: 18337258

10

Single nucleotide polymorphisms associated with colorectal cancer susceptibility and loss of heterozygosity in a Taiwanese population.

Yang CY, Lu RH, Lin CH, Jen CH, Tung CY, Yang SH, Lin JK, Jiang JK, Lin CH. Yang CY, et al. Among authors: jen ch. PLoS One. 2014 Jun 26;9(6):e100060. doi: 10.1371/journal.pone.0100060. eCollection 2014. PLoS One. 2014. PMID: 24968322 Free PMC article.

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