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Accurate prediction of protein structures and interactions using a three-track neural network.
Baek M, DiMaio F, Anishchenko I, Dauparas J, Ovchinnikov S, Lee GR, Wang J, Cong Q, Kinch LN, Schaeffer RD, Millán C, Park H, Adams C, Glassman CR, DeGiovanni A, Pereira JH, Rodrigues AV, van Dijk AA, Ebrecht AC, Opperman DJ, Sagmeister T, Buhlheller C, Pavkov-Keller T, Rathinaswamy MK, Dalwadi U, Yip CK, Burke JE, Garcia KC, Grishin NV, Adams PD, Read RJ, Baker D. Baek M, et al. Among authors: ovchinnikov s. Science. 2021 Aug 20;373(6557):871-876. doi: 10.1126/science.abj8754. Epub 2021 Jul 15. Science. 2021. PMID: 34282049 Free PMC article.
Protein structure determination using metagenome sequence data.
Ovchinnikov S, Park H, Varghese N, Huang PS, Pavlopoulos GA, Kim DE, Kamisetty H, Kyrpides NC, Baker D. Ovchinnikov S, et al. Science. 2017 Jan 20;355(6322):294-298. doi: 10.1126/science.aah4043. Science. 2017. PMID: 28104891 Free PMC article.
Applications of contact predictions to structural biology.
Simkovic F, Ovchinnikov S, Baker D, Rigden DJ. Simkovic F, et al. Among authors: ovchinnikov s. IUCrJ. 2017 Apr 18;4(Pt 3):291-300. doi: 10.1107/S2052252517005115. eCollection 2017 May 1. IUCrJ. 2017. PMID: 28512576 Free PMC article. Review.
Cryo-EM structure of the protein-conducting ERAD channel Hrd1 in complex with Hrd3.
Schoebel S, Mi W, Stein A, Ovchinnikov S, Pavlovicz R, DiMaio F, Baker D, Chambers MG, Su H, Li D, Rapoport TA, Liao M. Schoebel S, et al. Among authors: ovchinnikov s. Nature. 2017 Aug 17;548(7667):352-355. doi: 10.1038/nature23314. Epub 2017 Jul 6. Nature. 2017. PMID: 28682307 Free PMC article.
124 results