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Page 1
Fragment assembly with short reads.
Chaisson M, Pevzner P, Tang H. Chaisson M, et al. Bioinformatics. 2004 Sep 1;20(13):2067-74. doi: 10.1093/bioinformatics/bth205. Epub 2004 Apr 1. Bioinformatics. 2004. PMID: 15059830
SEQuel: improving the accuracy of genome assemblies.
Ronen R, Boucher C, Chitsaz H, Pevzner P. Ronen R, et al. Bioinformatics. 2012 Jun 15;28(12):i188-96. doi: 10.1093/bioinformatics/bts219. Bioinformatics. 2012. PMID: 22689760 Free PMC article.
ExSPAnder: a universal repeat resolver for DNA fragment assembly.
Prjibelski AD, Vasilinetc I, Bankevich A, Gurevich A, Krivosheeva T, Nurk S, Pham S, Korobeynikov A, Lapidus A, Pevzner PA. Prjibelski AD, et al. Among authors: pevzner pa. Bioinformatics. 2014 Jun 15;30(12):i293-301. doi: 10.1093/bioinformatics/btu266. Bioinformatics. 2014. PMID: 24931996 Free PMC article.
Assembling short reads from jumping libraries with large insert sizes.
Vasilinetc I, Prjibelski AD, Gurevich A, Korobeynikov A, Pevzner PA. Vasilinetc I, et al. Among authors: pevzner pa. Bioinformatics. 2015 Oct 15;31(20):3262-8. doi: 10.1093/bioinformatics/btv337. Epub 2015 Jun 3. Bioinformatics. 2015. PMID: 26040456
Top-down analysis of protein samples by de novo sequencing techniques.
Vyatkina K, Wu S, Dekker LJ, VanDuijn MM, Liu X, Tolić N, Luider TM, Paša-Tolić L, Pevzner PA. Vyatkina K, et al. Among authors: pevzner pa. Bioinformatics. 2016 Sep 15;32(18):2753-9. doi: 10.1093/bioinformatics/btw307. Epub 2016 May 14. Bioinformatics. 2016. PMID: 27187201 Free PMC article.
228 results