Vedithi SC - Search Results

1

Predicted structural mimicry of spike receptor-binding motifs from highly pathogenic human coronaviruses.

Beaudoin CA, Jamasb AR, Alsulami AF, Copoiu L, van Tonder AJ, Hala S, Bannerman BP, Thomas SE, Vedithi SC, Torres PHM, Blundell TL. Beaudoin CA, et al. Among authors: vedithi sc. Comput Struct Biotechnol J. 2021 Jul 2;19:3938-3953. doi: 10.1016/j.csbj.2021.06.041. eCollection 2021. Comput Struct Biotechnol J. 2021. PMID: 34234921 Free PMC article.

2

The Molecular Organization of Human cGMP Specific Phosphodiesterase 6 (PDE6): Structural Implications of Somatic Mutations in Cancer and Retinitis Pigmentosa.

Maryam A, Vedithi SC, Khalid RR, Alsulami AF, Torres PHM, Siddiqi AR, Blundell TL. Maryam A, et al. Among authors: vedithi sc. Comput Struct Biotechnol J. 2019 Mar 6;17:378-389. doi: 10.1016/j.csbj.2019.03.004. eCollection 2019. Comput Struct Biotechnol J. 2019. PMID: 30962868 Free PMC article.

3

Computational saturation mutagenesis to predict structural consequences of systematic mutations in the beta subunit of RNA polymerase in Mycobacterium leprae.

Vedithi SC, Rodrigues CHM, Portelli S, Skwark MJ, Das M, Ascher DB, Blundell TL, Malhotra S. Vedithi SC, et al. Comput Struct Biotechnol J. 2020 Jan 17;18:271-286. doi: 10.1016/j.csbj.2020.01.002. eCollection 2020. Comput Struct Biotechnol J. 2020. PMID: 32042379 Free PMC article.

4

Exploring the structural basis of conformational heterogeneity and autoinhibition of human cGMP-specific protein kinase Iα through computational modelling and molecular dynamics simulations.

Maryam A, Khalid RR, Vedithi SC, Ece A, Çınaroğlu SS, Siddiqi AR, Blundell TL. Maryam A, et al. Among authors: vedithi sc. Comput Struct Biotechnol J. 2020 Jun 12;18:1625-1638. doi: 10.1016/j.csbj.2020.06.016. eCollection 2020. Comput Struct Biotechnol J. 2020. PMID: 32670503 Free PMC article.

5

HARP: a database of structural impacts of systematic missense mutations in drug targets of Mycobacterium leprae.

Vedithi SC, Malhotra S, Skwark MJ, Munir A, Acebrón-García-De-Eulate M, Waman VP, Alsulami A, Ascher DB, Blundell TL. Vedithi SC, et al. Comput Struct Biotechnol J. 2020 Nov 19;18:3692-3704. doi: 10.1016/j.csbj.2020.11.013. eCollection 2020. Comput Struct Biotechnol J. 2020. PMID: 33304465 Free PMC article.

6

SARS-CoV-2 3D database: understanding the coronavirus proteome and evaluating possible drug targets.

Alsulami AF, Thomas SE, Jamasb AR, Beaudoin CA, Moghul I, Bannerman B, Copoiu L, Vedithi SC, Torres P, Blundell TL. Alsulami AF, et al. Among authors: vedithi sc. Brief Bioinform. 2021 Mar 22;22(2):769-780. doi: 10.1093/bib/bbaa404. Brief Bioinform. 2021. PMID: 33416848 Free PMC article.

7

COSMIC Cancer Gene Census 3D database: understanding the impacts of mutations on cancer targets.

Alsulami AF, Torres PHM, Moghul I, Arif SM, Chaplin AK, Vedithi SC, Blundell TL. Alsulami AF, et al. Among authors: vedithi sc. Brief Bioinform. 2021 Nov 5;22(6):bbab220. doi: 10.1093/bib/bbab220. Brief Bioinform. 2021. PMID: 34137435 Free PMC article.

8

In silico analysis of mutations near S1/S2 cleavage site in SARS-CoV-2 spike protein reveals increased propensity of glycosylation in Omicron strain.

Beaudoin CA, Pandurangan AP, Kim SY, Hamaia SW, Huang CL, Blundell TL, Vedithi SC, Jackson AP. Beaudoin CA, et al. Among authors: vedithi sc. J Med Virol. 2022 Sep;94(9):4181-4192. doi: 10.1002/jmv.27845. Epub 2022 Jun 7. J Med Virol. 2022. PMID: 35575289 Free PMC article.

9

Decoding the similarities and differences among mycobacterial species.

Malhotra S, Vedithi SC, Blundell TL. Malhotra S, et al. Among authors: vedithi sc. PLoS Negl Trop Dis. 2017 Aug 30;11(8):e0005883. doi: 10.1371/journal.pntd.0005883. eCollection 2017 Aug. PLoS Negl Trop Dis. 2017. PMID: 28854187 Free PMC article.

10

Mycobacterial genomics and structural bioinformatics: opportunities and challenges in drug discovery.

Waman VP, Vedithi SC, Thomas SE, Bannerman BP, Munir A, Skwark MJ, Malhotra S, Blundell TL. Waman VP, et al. Among authors: vedithi sc. Emerg Microbes Infect. 2019;8(1):109-118. doi: 10.1080/22221751.2018.1561158. Emerg Microbes Infect. 2019. PMID: 30866765 Free PMC article. Review.

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