Jia Y - Search Results

1

Mako: A Graph-based Pattern Growth Approach to Detect Complex Structural Variants.

Lin J, Yang X, Kosters W, Xu T, Jia Y, Wang S, Zhu Q, Ryan M, Guo L, Zhang C; Human Genome Structural Variation Consortium; Lee C, Devine SE, Eichler EE, Ye K. Lin J, et al. Among authors: jia y. Genomics Proteomics Bioinformatics. 2022 Feb;20(1):205-218. doi: 10.1016/j.gpb.2021.03.007. Epub 2021 Jul 3. Genomics Proteomics Bioinformatics. 2022. PMID: 34224879 Free PMC article.

2

Chromosome-Scale Genome Assembly of Fusarium oxysporum Strain Fo47, a Fungal Endophyte and Biocontrol Agent.

Wang B, Yu H, Jia Y, Dong Q, Steinberg C, Alabouvette C, Edel-Hermann V, Kistler HC, Ye K, Ma LJ, Guo L. Wang B, et al. Among authors: jia y. Mol Plant Microbe Interact. 2020 Sep;33(9):1108-1111. doi: 10.1094/MPMI-05-20-0116-A. Epub 2020 Jul 28. Mol Plant Microbe Interact. 2020. PMID: 32552518 Free article.

3

High-quality Arabidopsis thaliana Genome Assembly with Nanopore and HiFi Long Reads.

Wang B, Yang X, Jia Y, Xu Y, Jia P, Dang N, Wang S, Xu T, Zhao X, Gao S, Dong Q, Ye K. Wang B, et al. Among authors: jia p, jia y. Genomics Proteomics Bioinformatics. 2022 Feb;20(1):4-13. doi: 10.1016/j.gpb.2021.08.003. Epub 2021 Sep 3. Genomics Proteomics Bioinformatics. 2022. PMID: 34487862 Free PMC article.

4

Three chromosome-scale Papaver genomes reveal punctuated patchwork evolution of the morphinan and noscapine biosynthesis pathway.

Yang X, Gao S, Guo L, Wang B, Jia Y, Zhou J, Che Y, Jia P, Lin J, Xu T, Sun J, Ye K. Yang X, et al. Among authors: jia p, jia y. Nat Commun. 2021 Oct 15;12(1):6030. doi: 10.1038/s41467-021-26330-8. Nat Commun. 2021. PMID: 34654815 Free PMC article.

5

A global survey of the transcriptome of the opium poppy (Papaver somniferum) based on single-molecule long-read isoform sequencing.

Xu T, Yang X, Jia Y, Li Z, Tang G, Li X, Wang B, Wang T, Lin J, Guo L, Ye K. Xu T, et al. Among authors: jia y. Plant J. 2022 Apr;110(2):607-620. doi: 10.1111/tpj.15689. Epub 2022 Feb 26. Plant J. 2022. PMID: 35092713 Free article.

6

A Chromosome-Level Reference Genome of Chinese Balloon Flower (Platycodon grandiflorus).

Jia Y, Chen S, Chen W, Zhang P, Su Z, Zhang L, Xu M, Guo L. Jia Y, et al. Front Genet. 2022 Apr 8;13:869784. doi: 10.3389/fgene.2022.869784. eCollection 2022. Front Genet. 2022. PMID: 35464833 Free PMC article. No abstract available.

7

The tissue-specific chromatin accessibility landscape of Papaver somniferum.

Jia Y, Xu Y, Wang B, Guo L, Guo M, Che X, Ye K. Jia Y, et al. Front Genet. 2023 Mar 15;14:1136736. doi: 10.3389/fgene.2023.1136736. eCollection 2023. Front Genet. 2023. PMID: 37007951 Free PMC article. No abstract available.

8

Reply to "Subgenome-aware analyses suggest a reticulate allopolyploidization origin in three Papaver genomes".

Yang X, Gao S, Xu T, Wang B, Jia Y, Ye K. Yang X, et al. Among authors: jia y. Nat Commun. 2023 Apr 19;14(1):2203. doi: 10.1038/s41467-023-37940-9. Nat Commun. 2023. PMID: 37076521 Free PMC article. No abstract available.

9

Near telomere-to-telomere genome assemblies of two Chlorella species unveil the composition and evolution of centromeres in green algae.

Wang B, Jia Y, Dang N, Yu J, Bush SJ, Gao S, He W, Wang S, Guo H, Yang X, Ma W, Ye K. Wang B, et al. Among authors: jia y. BMC Genomics. 2024 Apr 10;25(1):356. doi: 10.1186/s12864-024-10280-8. BMC Genomics. 2024. PMID: 38600443 Free PMC article.

10

The centromere landscapes of four karyotypically diverse Papaver species provide insights into chromosome evolution and speciation.

Gao S, Jia Y, Guo H, Xu T, Wang B, Bush SJ, Wan S, Zhang Y, Yang X, Ye K. Gao S, et al. Among authors: jia y. Cell Genom. 2024 Aug 14;4(8):100626. doi: 10.1016/j.xgen.2024.100626. Epub 2024 Jul 30. Cell Genom. 2024. PMID: 39084227 Free PMC article.

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