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Genetic Variability of the SARS-CoV-2 Pocketome.
Yazdani S, De Maio N, Ding Y, Shahani V, Goldman N, Schapira M. Yazdani S, et al. Among authors: schapira m. J Proteome Res. 2021 Aug 6;20(8):4212-4215. doi: 10.1021/acs.jproteome.1c00206. Epub 2021 Jun 28. J Proteome Res. 2021. PMID: 34180678
Structural diversity of the epigenetics pocketome.
Cabaye A, Nguyen KT, Liu L, Pande V, Schapira M. Cabaye A, et al. Among authors: schapira m. Proteins. 2015 Jul;83(7):1316-26. doi: 10.1002/prot.24830. Epub 2015 May 29. Proteins. 2015. PMID: 25974248
Structure-based view of the druggable genome.
Wang J, Yazdani S, Han A, Schapira M. Wang J, et al. Among authors: schapira m. Drug Discov Today. 2020 Mar;25(3):561-567. doi: 10.1016/j.drudis.2020.02.006. Epub 2020 Feb 19. Drug Discov Today. 2020. PMID: 32084498
Probing the SAM Binding Site of SARS-CoV-2 Nsp14 In Vitro Using SAM Competitive Inhibitors Guides Developing Selective Bisubstrate Inhibitors.
Devkota K, Schapira M, Perveen S, Khalili Yazdi A, Li F, Chau I, Ghiabi P, Hajian T, Loppnau P, Bolotokova A, Satchell KJF, Wang K, Li D, Liu J, Smil D, Luo M, Jin J, Fish PV, Brown PJ, Vedadi M. Devkota K, et al. Among authors: schapira m. SLAS Discov. 2021 Oct;26(9):1200-1211. doi: 10.1177/24725552211026261. Epub 2021 Jul 1. SLAS Discov. 2021. PMID: 34192965 Free PMC article.
Discovery of a Novel DCAF1 Ligand Using a Drug-Target Interaction Prediction Model: Generalizing Machine Learning to New Drug Targets.
Kimani SW, Owen J, Green SR, Li F, Li Y, Dong A, Brown PJ, Ackloo S, Kuter D, Yang C, MacAskill M, MacKinnon SS, Arrowsmith CH, Schapira M, Shahani V, Halabelian L. Kimani SW, et al. Among authors: schapira m. J Chem Inf Model. 2023 Jul 10;63(13):4070-4078. doi: 10.1021/acs.jcim.3c00082. Epub 2023 Jun 23. J Chem Inf Model. 2023. PMID: 37350740 Free PMC article.
Drug Discovery in Low Data Regimes: Leveraging a Computational Pipeline for the Discovery of Novel SARS-CoV-2 Nsp14-MTase Inhibitors.
Nigam A, Hurley MFD, Li F, Konkoľová E, Klíma M, Trylčová J, Pollice R, Çinaroğlu SS, Levin-Konigsberg R, Handjaya J, Schapira M, Chau I, Perveen S, Ng HL, Ümit Kaniskan H, Han Y, Singh S, Gorgulla C, Kundaje A, Jin J, Voelz VA, Weber J, Nencka R, Boura E, Vedadi M, Aspuru-Guzik A. Nigam A, et al. Among authors: schapira m. bioRxiv [Preprint]. 2024 Jan 13:2023.10.03.560722. doi: 10.1101/2023.10.03.560722. bioRxiv. 2024. PMID: 37873443 Free PMC article. Preprint.
ChromoHub V2: cancer genomics.
Shah MA, Denton EL, Liu L, Schapira M. Shah MA, et al. Among authors: schapira m. Bioinformatics. 2014 Feb 15;30(4):590-2. doi: 10.1093/bioinformatics/btt710. Epub 2013 Dec 6. Bioinformatics. 2014. PMID: 24319001 Free PMC article.
567 results