Azodi CB - Search Results

1

Optimizing expression quantitative trait locus mapping workflows for single-cell studies.

Cuomo ASE, Alvari G, Azodi CB; single-cell eQTLGen consortium; McCarthy DJ, Bonder MJ. Cuomo ASE, et al. Among authors: azodi cb. Genome Biol. 2021 Jun 24;22(1):188. doi: 10.1186/s13059-021-02407-x. Genome Biol. 2021. PMID: 34167583 Free PMC article.

2

splatPop: simulating population scale single-cell RNA sequencing data.

Azodi CB, Zappia L, Oshlack A, McCarthy DJ. Azodi CB, et al. Genome Biol. 2021 Dec 15;22(1):341. doi: 10.1186/s13059-021-02546-1. Genome Biol. 2021. PMID: 34911537 Free PMC article.

3

Opening the Black Box: Interpretable Machine Learning for Geneticists.

Azodi CB, Tang J, Shiu SH. Azodi CB, et al. Trends Genet. 2020 Jun;36(6):442-455. doi: 10.1016/j.tig.2020.03.005. Epub 2020 Apr 17. Trends Genet. 2020. PMID: 32396837 Review.

4

Benchmarking Parametric and Machine Learning Models for Genomic Prediction of Complex Traits.

Azodi CB, Bolger E, McCarren A, Roantree M, de Los Campos G, Shiu SH. Azodi CB, et al. G3 (Bethesda). 2019 Nov 5;9(11):3691-3702. doi: 10.1534/g3.119.400498. G3 (Bethesda). 2019. PMID: 31533955 Free PMC article.

5

Predictive Models of Spatial Transcriptional Response to High Salinity.

Uygun S, Seddon AE, Azodi CB, Shiu SH. Uygun S, et al. Among authors: azodi cb. Plant Physiol. 2017 May;174(1):450-464. doi: 10.1104/pp.16.01828. Epub 2017 Apr 3. Plant Physiol. 2017. PMID: 28373393 Free PMC article.

6

Evolutionary characteristics of intergenic transcribed regions indicate rare novel genes and widespread noisy transcription in the Poaceae.

Lloyd JP, Bowman MJ, Azodi CB, Sowers RP, Moghe GD, Childs KL, Shiu SH. Lloyd JP, et al. Among authors: azodi cb. Sci Rep. 2019 Aug 20;9(1):12122. doi: 10.1038/s41598-019-47797-y. Sci Rep. 2019. PMID: 31431676 Free PMC article.

7

Cis-Regulatory Code for Predicting Plant Cell-Type Transcriptional Response to High Salinity.

Uygun S, Azodi CB, Shiu SH. Uygun S, et al. Among authors: azodi cb. Plant Physiol. 2019 Dec;181(4):1739-1751. doi: 10.1104/pp.19.00653. Epub 2019 Sep 24. Plant Physiol. 2019. PMID: 31551359 Free PMC article.

8

Transcriptome-Based Prediction of Complex Traits in Maize.

Azodi CB, Pardo J, VanBuren R, de Los Campos G, Shiu SH. Azodi CB, et al. Plant Cell. 2020 Jan;32(1):139-151. doi: 10.1105/tpc.19.00332. Epub 2019 Oct 22. Plant Cell. 2020. PMID: 31641024 Free PMC article.

9

The cis-regulatory codes of response to combined heat and drought stress in Arabidopsis thaliana.

Azodi CB, Lloyd JP, Shiu SH. Azodi CB, et al. NAR Genom Bioinform. 2020 Jul 21;2(3):lqaa049. doi: 10.1093/nargab/lqaa049. eCollection 2020 Sep. NAR Genom Bioinform. 2020. PMID: 33575601 Free PMC article.

10

[No title available]

[No authors listed] [No authors listed] PMID: 33792705

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