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Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Genome Sequencing from Post-Mortem Formalin-Fixed, Paraffin-Embedded Lung Tissues.
Van Campenhout C, De Mendonça R, Alexiou B, De Clercq S, Racu ML, Royer-Chardon C, Rusu S, Van Eycken M, Artesi M, Durkin K, Mardulyn P, Bours V, Decaestecker C, Remmelink M, Salmon I, D'Haene N. Van Campenhout C, et al. Among authors: durkin k. J Mol Diagn. 2021 Sep;23(9):1065-1077. doi: 10.1016/j.jmoldx.2021.05.016. Epub 2021 Jun 18. J Mol Diagn. 2021. PMID: 34153515 Free PMC article.
Monitoring molecular response in adult T-cell leukemia by high-throughput sequencing analysis of HTLV-1 clonality.
Artesi M, Marçais A, Durkin K, Rosewick N, Hahaut V, Suarez F, Trinquand A, Lhermitte L, Asnafi V, Avettand-Fenoel V, Burny A, Georges M, Hermine O, Van den Broeke A. Artesi M, et al. Among authors: durkin k. Leukemia. 2017 Nov;31(11):2532-2535. doi: 10.1038/leu.2017.260. Epub 2017 Aug 16. Leukemia. 2017. PMID: 28811663 Free PMC article. No abstract available.
Targeted deep sequencing reveals clonal and subclonal mutational signatures in Adult T-cell leukemia/lymphoma and defines an unfavorable indolent subtype.
Marçais A, Lhermitte L, Artesi M, Laurent C, Durkin K, Hahaut V, Rosewick N, Suarez F, Sibon D, Cheminant M, Avettand-Fenoel V, Bruneau J, Georges M, Pique C, Van den Broeke A, Asnafi V, Hermine O. Marçais A, et al. Among authors: durkin k. Leukemia. 2021 Mar;35(3):764-776. doi: 10.1038/s41375-020-0900-3. Epub 2020 Jun 17. Leukemia. 2021. PMID: 32555298 Free article.
A Recurrent Mutation at Position 26340 of SARS-CoV-2 Is Associated with Failure of the E Gene Quantitative Reverse Transcription-PCR Utilized in a Commercial Dual-Target Diagnostic Assay.
Artesi M, Bontems S, Göbbels P, Franckh M, Maes P, Boreux R, Meex C, Melin P, Hayette MP, Bours V, Durkin K. Artesi M, et al. Among authors: durkin k. J Clin Microbiol. 2020 Sep 22;58(10):e01598-20. doi: 10.1128/JCM.01598-20. Print 2020 Sep 22. J Clin Microbiol. 2020. PMID: 32690547 Free PMC article.
An Improved Sequencing-Based Bioinformatics Pipeline to Track the Distribution and Clonal Architecture of Proviral Integration Sites.
Rosewick N, Hahaut V, Durkin K, Artesi M, Karpe S, Wayet J, Griebel P, Arsic N, Marçais A, Hermine O, Burny A, Georges M, Van den Broeke A. Rosewick N, et al. Among authors: durkin k. Front Microbiol. 2020 Oct 20;11:587306. doi: 10.3389/fmicb.2020.587306. eCollection 2020. Front Microbiol. 2020. PMID: 33193242 Free PMC article.
A Phylodynamic Workflow to Rapidly Gain Insights into the Dispersal History and Dynamics of SARS-CoV-2 Lineages.
Dellicour S, Durkin K, Hong SL, Vanmechelen B, Martí-Carreras J, Gill MS, Meex C, Bontems S, André E, Gilbert M, Walker C, Maio N, Faria NR, Hadfield J, Hayette MP, Bours V, Wawina-Bokalanga T, Artesi M, Baele G, Maes P. Dellicour S, et al. Among authors: durkin k. Mol Biol Evol. 2021 Apr 13;38(4):1608-1613. doi: 10.1093/molbev/msaa284. Mol Biol Evol. 2021. PMID: 33316043 Free PMC article.
PCIP-seq: simultaneous sequencing of integrated viral genomes and their insertion sites with long reads.
Artesi M, Hahaut V, Cole B, Lambrechts L, Ashrafi F, Marçais A, Hermine O, Griebel P, Arsic N, van der Meer F, Burny A, Bron D, Bianchi E, Delvenne P, Bours V, Charlier C, Georges M, Vandekerckhove L, Van den Broeke A, Durkin K. Artesi M, et al. Among authors: durkin k. Genome Biol. 2021 Apr 6;22(1):97. doi: 10.1186/s13059-021-02307-0. Genome Biol. 2021. PMID: 33823910 Free PMC article.
208 results