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Impact of DNA methylation on 3D genome structure.
Buitrago D, Labrador M, Arcon JP, Lema R, Flores O, Esteve-Codina A, Blanc J, Villegas N, Bellido D, Gut M, Dans PD, Heath SC, Gut IG, Brun Heath I, Orozco M. Buitrago D, et al. Among authors: arcon jp. Nat Commun. 2021 May 28;12(1):3243. doi: 10.1038/s41467-021-23142-8. Nat Commun. 2021. PMID: 34050148 Free PMC article.
Sequence-dependent structural properties of B-DNA: what have we learned in 40 years?
da Rosa G, Grille L, Calzada V, Ahmad K, Arcon JP, Battistini F, Bayarri G, Bishop T, Carloni P, Cheatham Iii T, Collepardo-Guevara R, Czub J, Espinosa JR, Galindo-Murillo R, Harris SA, Hospital A, Laughton C, Maddocks JH, Noy A, Orozco M, Pasi M, Pérez A, Petkevičiūtė-Gerlach D, Sharma R, Sun R, Dans PD. da Rosa G, et al. Among authors: arcon jp. Biophys Rev. 2021 Nov 13;13(6):995-1005. doi: 10.1007/s12551-021-00893-8. eCollection 2021 Dec. Biophys Rev. 2021. PMID: 35059023 Free PMC article. Review.
MiOS, an integrated imaging and computational strategy to model gene folding with nucleosome resolution.
Neguembor MV, Arcon JP, Buitrago D, Lema R, Walther J, Garate X, Martin L, Romero P, AlHaj Abed J, Gut M, Blanc J, Lakadamyali M, Wu CT, Brun Heath I, Orozco M, Dans PD, Cosma MP. Neguembor MV, et al. Among authors: arcon jp. Nat Struct Mol Biol. 2022 Oct;29(10):1011-1023. doi: 10.1038/s41594-022-00839-y. Epub 2022 Oct 11. Nat Struct Mol Biol. 2022. PMID: 36220894 Free PMC article.
Deciphering the mechanical code of the genome and epigenome.
Basu A, Bobrovnikov DG, Cieza B, Arcon JP, Qureshi Z, Orozco M, Ha T. Basu A, et al. Among authors: arcon jp. Nat Struct Mol Biol. 2022 Dec;29(12):1178-1187. doi: 10.1038/s41594-022-00877-6. Epub 2022 Dec 5. Nat Struct Mol Biol. 2022. PMID: 36471057 Free PMC article.
Biased Docking for Protein-Ligand Pose Prediction.
Arcon JP, Turjanski AG, Martí MA, Forli S. Arcon JP, et al. Methods Mol Biol. 2021;2266:39-72. doi: 10.1007/978-1-0716-1209-5_3. Methods Mol Biol. 2021. PMID: 33759120 Free PMC article.
Solvents to Fragments to Drugs: MD Applications in Drug Design.
Defelipe LA, Arcon JP, Modenutti CP, Marti MA, Turjanski AG, Barril X. Defelipe LA, et al. Among authors: arcon jp. Molecules. 2018 Dec 11;23(12):3269. doi: 10.3390/molecules23123269. Molecules. 2018. PMID: 30544890 Free PMC article. Review.
17 results