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Needs for an Integration of Specific Data Sources and Items - First Insights of a National Survey Within the German Center for Infection Research.
Jakob CEM, Stecher M, Fuhrmann S, Wingen-Heimann S, Heinen S, Anton G, Behnke M, Behrends U, Boeker M, Castell S, Demski H, Diefenbach M, Falgenhauer JC, Fritzenwanker M, Gastmeier P, Gerhard M, Glöckner S, Golubovic M, Gunsenheimer Bartmeyer B, Ingenerf J, Kaiser R, Körner ML, Loag W, Mchardy A, Molitor E, Nübel U, Pritsch M, Ramharter M, Rieg SR, Rupp J, Schindler D, Schwudke D, Spinner C, Stottmeier B, Vehreschild M, Willmann M, Vehreschild JJ. Jakob CEM, et al. Among authors: mchardy a. Stud Health Technol Inform. 2021 May 24;278:237-244. doi: 10.3233/SHTI210075. Stud Health Technol Inform. 2021. PMID: 34042900
Predicting antimicrobial resistance in Pseudomonas aeruginosa with machine learning-enabled molecular diagnostics.
Khaledi A, Weimann A, Schniederjans M, Asgari E, Kuo TH, Oliver A, Cabot G, Kola A, Gastmeier P, Hogardt M, Jonas D, Mofrad MR, Bremges A, McHardy AC, Häussler S. Khaledi A, et al. Among authors: mchardy ac. EMBO Mol Med. 2020 Mar 6;12(3):e10264. doi: 10.15252/emmm.201910264. Epub 2020 Feb 12. EMBO Mol Med. 2020. PMID: 32048461 Free PMC article.
Swarm Learning for decentralized and confidential clinical machine learning.
Warnat-Herresthal S, Schultze H, Shastry KL, Manamohan S, Mukherjee S, Garg V, Sarveswara R, Händler K, Pickkers P, Aziz NA, Ktena S, Tran F, Bitzer M, Ossowski S, Casadei N, Herr C, Petersheim D, Behrends U, Kern F, Fehlmann T, Schommers P, Lehmann C, Augustin M, Rybniker J, Altmüller J, Mishra N, Bernardes JP, Krämer B, Bonaguro L, Schulte-Schrepping J, De Domenico E, Siever C, Kraut M, Desai M, Monnet B, Saridaki M, Siegel CM, Drews A, Nuesch-Germano M, Theis H, Heyckendorf J, Schreiber S, Kim-Hellmuth S; COVID-19 Aachen Study (COVAS); Nattermann J, Skowasch D, Kurth I, Keller A, Bals R, Nürnberg P, Rieß O, Rosenstiel P, Netea MG, Theis F, Mukherjee S, Backes M, Aschenbrenner AC, Ulas T; Deutsche COVID-19 Omics Initiative (DeCOI); Breteler MMB, Giamarellos-Bourboulis EJ, Kox M, Becker M, Cheran S, Woodacre MS, Goh EL, Schultze JL. Warnat-Herresthal S, et al. Nature. 2021 Jun;594(7862):265-270. doi: 10.1038/s41586-021-03583-3. Epub 2021 May 26. Nature. 2021. PMID: 34040261 Free PMC article.
Longitudinal Multi-omics Analyses Identify Responses of Megakaryocytes, Erythroid Cells, and Plasmablasts as Hallmarks of Severe COVID-19.
Bernardes JP, Mishra N, Tran F, Bahmer T, Best L, Blase JI, Bordoni D, Franzenburg J, Geisen U, Josephs-Spaulding J, Köhler P, Künstner A, Rosati E, Aschenbrenner AC, Bacher P, Baran N, Boysen T, Brandt B, Bruse N, Dörr J, Dräger A, Elke G, Ellinghaus D, Fischer J, Forster M, Franke A, Franzenburg S, Frey N, Friedrichs A, Fuß J, Glück A, Hamm J, Hinrichsen F, Hoeppner MP, Imm S, Junker R, Kaiser S, Kan YH, Knoll R, Lange C, Laue G, Lier C, Lindner M, Marinos G, Markewitz R, Nattermann J, Noth R, Pickkers P, Rabe KF, Renz A, Röcken C, Rupp J, Schaffarzyk A, Scheffold A, Schulte-Schrepping J, Schunk D, Skowasch D, Ulas T, Wandinger KP, Wittig M, Zimmermann J, Busch H, Hoyer BF, Kaleta C, Heyckendorf J, Kox M, Rybniker J, Schreiber S, Schultze JL, Rosenstiel P; HCA Lung Biological Network; Deutsche COVID-19 Omics Initiative (DeCOI). Bernardes JP, et al. Immunity. 2020 Dec 15;53(6):1296-1314.e9. doi: 10.1016/j.immuni.2020.11.017. Epub 2020 Nov 26. Immunity. 2020. PMID: 33296687 Free PMC article.
Survival trade-offs in plant roots during colonization by closely related beneficial and pathogenic fungi.
Hacquard S, Kracher B, Hiruma K, Münch PC, Garrido-Oter R, Thon MR, Weimann A, Damm U, Dallery JF, Hainaut M, Henrissat B, Lespinet O, Sacristán S, Ver Loren van Themaat E, Kemen E, McHardy AC, Schulze-Lefert P, O'Connell RJ. Hacquard S, et al. Among authors: mchardy ac. Nat Commun. 2016 May 6;7:11362. doi: 10.1038/ncomms11362. Nat Commun. 2016. PMID: 27150427 Free PMC article.
From Genomes to Phenotypes: Traitar, the Microbial Trait Analyzer.
Weimann A, Mooren K, Frank J, Pope PB, Bremges A, McHardy AC. Weimann A, et al. Among authors: mchardy ac. mSystems. 2016 Dec 27;1(6):e00101-16. doi: 10.1128/mSystems.00101-16. eCollection 2016 Nov-Dec. mSystems. 2016. PMID: 28066816 Free PMC article.
Metagenomics and CAZyme Discovery.
Kunath BJ, Bremges A, Weimann A, McHardy AC, Pope PB. Kunath BJ, et al. Among authors: mchardy ac. Methods Mol Biol. 2017;1588:255-277. doi: 10.1007/978-1-4939-6899-2_20. Methods Mol Biol. 2017. PMID: 28417375
173 results