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Formation, characterization and modeling of emergent synthetic microbial communities.
Wang J, Carper DL, Burdick LH, Shrestha HK, Appidi MR, Abraham PE, Timm CM, Hettich RL, Pelletier DA, Doktycz MJ. Wang J, et al. Among authors: appidi mr. Comput Struct Biotechnol J. 2021 Apr 9;19:1917-1927. doi: 10.1016/j.csbj.2021.03.034. eCollection 2021. Comput Struct Biotechnol J. 2021. PMID: 33995895 Free PMC article.
Metaproteomics reveals insights into microbial structure, interactions, and dynamic regulation in defined communities as they respond to environmental disturbance.
Shrestha HK, Appidi MR, Villalobos Solis MI, Wang J, Carper DL, Burdick L, Pelletier DA, Doktycz MJ, Hettich RL, Abraham PE. Shrestha HK, et al. Among authors: appidi mr. BMC Microbiol. 2021 Nov 8;21(1):308. doi: 10.1186/s12866-021-02370-4. BMC Microbiol. 2021. PMID: 34749649 Free PMC article.
Decoding the chemical language of Suillus fungi: genome mining and untargeted metabolomics uncover terpene chemical diversity.
Mudbhari S, Lofgren L, Appidi MR, Vilgalys R, Hettich RL, Abraham P. Mudbhari S, et al. Among authors: appidi mr. bioRxiv [Preprint]. 2023 Nov 21:2023.11.20.567897. doi: 10.1101/2023.11.20.567897. bioRxiv. 2023. Update in: mSystems. 2024 Apr 16;9(4):e0122523. doi: 10.1128/msystems.01225-23 PMID: 38045323 Free PMC article. Updated. Preprint.