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Genomic surveillance activities unveil the introduction of the SARS-CoV-2 B.1.525 variant of interest in Brazil: Case report.
Pereira F, Tosta S, Lima MM, Reboredo de Oliveira da Silva L, Nardy VB, Gómez MKA, Lima JG, Fonseca V, de Oliveira T, Lourenço J, Alcantara LC Jr, Giovanetti M, Leal A. Pereira F, et al. Among authors: fonseca v. J Med Virol. 2021 Sep;93(9):5523-5526. doi: 10.1002/jmv.27086. Epub 2021 May 25. J Med Virol. 2021. PMID: 33990970 Free PMC article.
Human Retrovirus Codon Usage from tRNA Point of View: Therapeutic Insights.
Frias D, Monteiro-Cunha JP, Mota-Miranda AC, Fonseca VS, de Oliveira T, Galvao-Castro B, Alcantara LC. Frias D, et al. Bioinform Biol Insights. 2013 Oct 10;7:335-45. doi: 10.4137/BBI.S12093. eCollection 2013. Bioinform Biol Insights. 2013. PMID: 24151425 Free PMC article.
A34 Automated profiling of the human virome from raw metagenomic data.
Moosa Y, Vilsker M, Vanden Eyden E, Fonseca V, Nooij S, Deforche K, de Oliveira T. Moosa Y, et al. Among authors: fonseca v. Virus Evol. 2017 Mar 5;3(Suppl 1):vew036.033. doi: 10.1093/ve/vew036.033. eCollection 2017 Mar. Virus Evol. 2017. PMID: 28845264 Free PMC article. No abstract available.
Genomic and epidemiological monitoring of yellow fever virus transmission potential.
Faria NR, Kraemer MUG, Hill SC, Goes de Jesus J, Aguiar RS, Iani FCM, Xavier J, Quick J, du Plessis L, Dellicour S, Thézé J, Carvalho RDO, Baele G, Wu CH, Silveira PP, Arruda MB, Pereira MA, Pereira GC, Lourenço J, Obolski U, Abade L, Vasylyeva TI, Giovanetti M, Yi D, Weiss DJ, Wint GRW, Shearer FM, Funk S, Nikolay B, Fonseca V, Adelino TER, Oliveira MAA, Silva MVF, Sacchetto L, Figueiredo PO, Rezende IM, Mello EM, Said RFC, Santos DA, Ferraz ML, Brito MG, Santana LF, Menezes MT, Brindeiro RM, Tanuri A, Dos Santos FCP, Cunha MS, Nogueira JS, Rocco IM, da Costa AC, Komninakis SCV, Azevedo V, Chieppe AO, Araujo ESM, Mendonça MCL, Dos Santos CC, Dos Santos CD, Mares-Guia AM, Nogueira RMR, Sequeira PC, Abreu RG, Garcia MHO, Abreu AL, Okumoto O, Kroon EG, de Albuquerque CFC, Lewandowski K, Pullan ST, Carroll M, de Oliveira T, Sabino EC, Souza RP, Suchard MA, Lemey P, Trindade GS, Drumond BP, Filippis AMB, Loman NJ, Cauchemez S, Alcantara LCJ, Pybus OG. Faria NR, et al. Among authors: fonseca v. Science. 2018 Aug 31;361(6405):894-899. doi: 10.1126/science.aat7115. Epub 2018 Aug 23. Science. 2018. PMID: 30139911 Free PMC article.
A computational method for the identification of Dengue, Zika and Chikungunya virus species and genotypes.
Fonseca V, Libin PJK, Theys K, Faria NR, Nunes MRT, Restovic MI, Freire M, Giovanetti M, Cuypers L, Nowé A, Abecasis A, Deforche K, Santiago GA, Siqueira IC, San EJ, Machado KCB, Azevedo V, Filippis AMB, Cunha RVD, Pybus OG, Vandamme AM, Alcantara LCJ, de Oliveira T. Fonseca V, et al. PLoS Negl Trop Dis. 2019 May 8;13(5):e0007231. doi: 10.1371/journal.pntd.0007231. eCollection 2019 May. PLoS Negl Trop Dis. 2019. PMID: 31067235 Free PMC article.
Circulation of chikungunya virus East/Central/South African lineage in Rio de Janeiro, Brazil.
Xavier J, Giovanetti M, Fonseca V, Thézé J, Gräf T, Fabri A, Goes de Jesus J, Lima de Mendonça MC, Damasceno Dos Santos Rodrigues C, Mares-Guia MA, Cardoso Dos Santos C, Fraga de Oliveira Tosta S, Candido D, Ribeiro Nogueira RM, Luiz de Abreu A, Kleber Oliveira W, Campelo de Albuquerque CF, Chieppe A, de Oliveira T, Brasil P, Calvet G, Carvalho Sequeira P, Rodrigues Faria N, Bispo de Filippis AM, Alcantara LCJ. Xavier J, et al. Among authors: fonseca v. PLoS One. 2019 Jun 11;14(6):e0217871. doi: 10.1371/journal.pone.0217871. eCollection 2019. PLoS One. 2019. PMID: 31185030 Free PMC article. Clinical Trial.
Yellow Fever Virus Reemergence and Spread in Southeast Brazil, 2016-2019.
Giovanetti M, de Mendonça MCL, Fonseca V, Mares-Guia MA, Fabri A, Xavier J, de Jesus JG, Gräf T, Dos Santos Rodrigues CD, Dos Santos CC, Sampaio SA, Chalhoub FLL, de Bruycker Nogueira F, Theze J, Romano APM, Ramos DG, de Abreu AL, Oliveira WK, do Carmo Said RF, de Alburque CFC, de Oliveira T, Fernandes CA, Aguiar SF, Chieppe A, Sequeira PC, Faria NR, Cunha RV, Alcantara LCJ, de Filippis AMB. Giovanetti M, et al. Among authors: fonseca v. J Virol. 2019 Dec 12;94(1):e01623-19. doi: 10.1128/JVI.01623-19. Print 2019 Dec 12. J Virol. 2019. PMID: 31597773 Free PMC article.
Return of the founder Chikungunya virus to its place of introduction into Brazil is revealed by genomic characterization of exanthematic disease cases.
Pereira Gusmão Maia Z, Mota Pereira F, do Carmo Said RF, Fonseca V, Gräf T, de Bruycker Nogueira F, Brandão Nardy V, Xavier J, Lima Maia M, Abreu AL, Campelo de Albuquerque CF, Kleber Oliveira W, Croda J, de Filippis AMB, Venancio Cunha R, Lourenço J, de Oliveira T, Faria NR, Junior Alcantara LC, Giovanetti M. Pereira Gusmão Maia Z, et al. Among authors: fonseca v. Emerg Microbes Infect. 2019 Dec 27;9(1):53-57. doi: 10.1080/22221751.2019.1701954. eCollection 2020. Emerg Microbes Infect. 2019. PMID: 31880218 Free PMC article.
Persistence of chikungunya ECSA genotype and local outbreak in an upper medium class neighborhood in Northeast Brazil.
Goes de Jesus J, da Luz Wallau G, Lima Maia M, Xavier J, Oliveira Lima MA, Fonseca V, Salgado de Abreu A, Fraga de Oliveira Tosta S, Ramos do Amaral H, Andrade Barbosa Lima I, Viana Silva P, Carlos Dos Santos D, Sousa de Oliveira A, Campos de Souza S, Barreto Falcão M, Cerqueira E, Ceschini Machado L, Sobral MC, Teodoro Rezende TM, Ribeiro Pereira M, Mota Pereira F, Pereira Gusmão Maia Z, Freitas de Oliveira França R, Luiz de Abreu A, Campelo de Albuquerque E Melo CF, Rodrigues Faria N, Venâncio da Cunha R, Giovanetti M, Alcantara LCJ. Goes de Jesus J, et al. Among authors: fonseca v. PLoS One. 2020 Jan 8;15(1):e0226098. doi: 10.1371/journal.pone.0226098. eCollection 2020. PLoS One. 2020. PMID: 31914137 Free PMC article.
1,036 results