Ardell DH - Search Results

1

tSFM 1.0: tRNA Structure-Function Mapper.

Lawrence TJ, Hadi-Nezhad F, Grosse I, Ardell DH. Lawrence TJ, et al. Among authors: ardell dh. Bioinformatics. 2021 Oct 25;37(20):3654-3656. doi: 10.1093/bioinformatics/btab247. Bioinformatics. 2021. PMID: 33904572 Free PMC article.

2

Targeting tRNA-synthetase interactions towards novel therapeutic discovery against eukaryotic pathogens.

Kelly P, Hadi-Nezhad F, Liu DY, Lawrence TJ, Linington RG, Ibba M, Ardell DH. Kelly P, et al. Among authors: ardell dh. PLoS Negl Trop Dis. 2020 Feb 27;14(2):e0007983. doi: 10.1371/journal.pntd.0007983. eCollection 2020 Feb. PLoS Negl Trop Dis. 2020. PMID: 32106219 Free PMC article.

3

Prediction of regulatory targets of alternative isoforms of the epidermal growth factor receptor in a glioblastoma cell line.

Weinholdt C, Wichmann H, Kotrba J, Ardell DH, Kappler M, Eckert AW, Vordermark D, Grosse I. Weinholdt C, et al. Among authors: ardell dh. BMC Bioinformatics. 2019 Aug 22;20(1):434. doi: 10.1186/s12859-019-2944-9. BMC Bioinformatics. 2019. PMID: 31438847 Free PMC article.

4

FAST: FAST Analysis of Sequences Toolbox.

Lawrence TJ, Kauffman KT, Amrine KC, Carper DL, Lee RS, Becich PJ, Canales CJ, Ardell DH. Lawrence TJ, et al. Among authors: ardell dh. Front Genet. 2015 May 19;6:172. doi: 10.3389/fgene.2015.00172. eCollection 2015. Front Genet. 2015. PMID: 26042145 Free PMC article.

5

tRNA functional signatures classify plastids as late-branching cyanobacteria.

Lawrence TJ, Amrine KC, Swingley WD, Ardell DH. Lawrence TJ, et al. Among authors: ardell dh. BMC Evol Biol. 2019 Dec 9;19(1):224. doi: 10.1186/s12862-019-1552-7. BMC Evol Biol. 2019. PMID: 31818253 Free PMC article.

6

Whole RNA-Sequencing and Transcriptome Assembly of Candida albicans and Candida africana under Chlamydospore-Inducing Conditions.

Giosa D, Felice MR, Lawrence TJ, Gulati M, Scordino F, Giuffrè L, Lo Passo C, D'Alessandro E, Criseo G, Ardell DH, Hernday AD, Nobile CJ, Romeo O. Giosa D, et al. Among authors: ardell dh. Genome Biol Evol. 2017 Jul 1;9(7):1971-1977. doi: 10.1093/gbe/evx143. Genome Biol Evol. 2017. PMID: 28810711 Free PMC article.

7

Structural and Genetic Determinants of Convergence in the Drosophila tRNA Structure-Function Map.

Phillips JB, Ardell DH. Phillips JB, et al. Among authors: ardell dh. J Mol Evol. 2021 Feb;89(1-2):103-116. doi: 10.1007/s00239-021-09995-z. Epub 2021 Feb 2. J Mol Evol. 2021. PMID: 33528599 Free PMC article.

8

CMCpy: Genetic Code-Message Coevolution Models in Python.

Becich PJ, Stark BP, Bhat HS, Ardell DH. Becich PJ, et al. Among authors: ardell dh. Evol Bioinform Online. 2013;9:111-25. doi: 10.4137/EBO.S11169. Epub 2013 Feb 27. Evol Bioinform Online. 2013. PMID: 23532367 Free PMC article.

9

SCANMS: adjusting for multiple comparisons in sliding window neutrality tests.

Ardell DH. Ardell DH. Bioinformatics. 2004 Aug 12;20(12):1986-8. doi: 10.1093/bioinformatics/bth187. Epub 2004 Apr 1. Bioinformatics. 2004. PMID: 15059827

10

tRNA signatures reveal a polyphyletic origin of SAR11 strains among alphaproteobacteria.

Amrine KC, Swingley WD, Ardell DH. Amrine KC, et al. Among authors: ardell dh. PLoS Comput Biol. 2014 Feb 27;10(2):e1003454. doi: 10.1371/journal.pcbi.1003454. eCollection 2014 Feb. PLoS Comput Biol. 2014. PMID: 24586126 Free PMC article.

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