Patel SS - Search Results

1

Assembly and Cryo-EM structure determination of yeast mitochondrial RNA polymerase initiation complex intermediates.

Martinez SE, Singh A, De Wijngaert B, Sultana S, Dharia C, Vanbuel H, Shen J, Vasilchuk D, Patel SS, Das K. Martinez SE, et al. Among authors: patel ss. STAR Protoc. 2021 Mar 31;2(2):100431. doi: 10.1016/j.xpro.2021.100431. eCollection 2021 Jun 18. STAR Protoc. 2021. PMID: 33870232 Free PMC article.

2

Kinetic and thermodynamic basis of promoter strength: multiple steps of transcription initiation by T7 RNA polymerase are modulated by the promoter sequence.

Bandwar RP, Jia Y, Stano NM, Patel SS. Bandwar RP, et al. Among authors: patel ss. Biochemistry. 2002 Mar 19;41(11):3586-95. doi: 10.1021/bi0158472. Biochemistry. 2002. PMID: 11888274

3

The +2 NTP binding drives open complex formation in T7 RNA polymerase.

Stano NM, Levin MK, Patel SS. Stano NM, et al. Among authors: patel ss. J Biol Chem. 2002 Oct 4;277(40):37292-300. doi: 10.1074/jbc.M201600200. Epub 2002 Jul 31. J Biol Chem. 2002. PMID: 12151383 Free article.

4

The energetics of consensus promoter opening by T7 RNA polymerase.

Bandwar RP, Patel SS. Bandwar RP, et al. Among authors: patel ss. J Mol Biol. 2002 Nov 15;324(1):63-72. doi: 10.1016/s0022-2836(02)01034-3. J Mol Biol. 2002. PMID: 12421559

5

T7 lysozyme represses T7 RNA polymerase transcription by destabilizing the open complex during initiation.

Stano NM, Patel SS. Stano NM, et al. Among authors: patel ss. J Biol Chem. 2004 Apr 16;279(16):16136-43. doi: 10.1074/jbc.M400139200. Epub 2004 Feb 5. J Biol Chem. 2004. PMID: 14764584 Free article.

6

The transition to an elongation complex by T7 RNA polymerase is a multistep process.

Bandwar RP, Ma N, Emanuel SA, Anikin M, Vassylyev DG, Patel SS, McAllister WT. Bandwar RP, et al. Among authors: patel ss. J Biol Chem. 2007 Aug 3;282(31):22879-86. doi: 10.1074/jbc.M702589200. Epub 2007 Jun 4. J Biol Chem. 2007. PMID: 17548349 Free PMC article.

7

Transcription initiation in a single-subunit RNA polymerase proceeds through DNA scrunching and rotation of the N-terminal subdomains.

Tang GQ, Roy R, Ha T, Patel SS. Tang GQ, et al. Among authors: patel ss. Mol Cell. 2008 Jun 6;30(5):567-77. doi: 10.1016/j.molcel.2008.04.003. Mol Cell. 2008. PMID: 18538655 Free PMC article.

8

Fluorescence mapping of the open complex of yeast mitochondrial RNA polymerase.

Tang GQ, Paratkar S, Patel SS. Tang GQ, et al. Among authors: patel ss. J Biol Chem. 2009 Feb 27;284(9):5514-22. doi: 10.1074/jbc.M807880200. Epub 2008 Dec 30. J Biol Chem. 2009. PMID: 19116203 Free PMC article.

9

Mitochondrial transcription factor Mtf1 traps the unwound non-template strand to facilitate open complex formation.

Paratkar S, Patel SS. Paratkar S, et al. Among authors: patel ss. J Biol Chem. 2010 Feb 5;285(6):3949-3956. doi: 10.1074/jbc.M109.050732. Epub 2009 Dec 11. J Biol Chem. 2010. PMID: 20008320 Free PMC article.

10

Real-time observation of the transition from transcription initiation to elongation of the RNA polymerase.

Tang GQ, Roy R, Bandwar RP, Ha T, Patel SS. Tang GQ, et al. Among authors: patel ss. Proc Natl Acad Sci U S A. 2009 Dec 29;106(52):22175-80. doi: 10.1073/pnas.0906979106. Epub 2009 Dec 11. Proc Natl Acad Sci U S A. 2009. PMID: 20018723 Free PMC article.

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