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PAR: a PARallel and distributed job crusher.
Berenger F, Coti C, Zhang KY. Berenger F, et al. Bioinformatics. 2010 Nov 15;26(22):2918-9. doi: 10.1093/bioinformatics/btq542. Epub 2010 Sep 23. Bioinformatics. 2010. PMID: 20870644
Entropy-accelerated exact clustering of protein decoys.
Berenger F, Zhou Y, Shrestha R, Zhang KY. Berenger F, et al. Bioinformatics. 2011 Apr 1;27(7):939-45. doi: 10.1093/bioinformatics/btr072. Epub 2011 Feb 9. Bioinformatics. 2011. PMID: 21310747
Accelerating ab initio phasing with de novo models.
Shrestha R, Berenger F, Zhang KY. Shrestha R, et al. Among authors: berenger f. Acta Crystallogr D Biol Crystallogr. 2011 Sep;67(Pt 9):804-12. doi: 10.1107/S090744491102779X. Epub 2011 Aug 9. Acta Crystallogr D Biol Crystallogr. 2011. PMID: 21904033
Durandal: fast exact clustering of protein decoys.
Berenger F, Shrestha R, Zhou Y, Simoncini D, Zhang KY. Berenger F, et al. J Comput Chem. 2012 Feb 5;33(4):471-4. doi: 10.1002/jcc.21988. Epub 2011 Nov 26. J Comput Chem. 2012. PMID: 22120171
30 results