Koide A - Search Results

1

Conformational interconversion of MLKL and disengagement from RIPK3 precede cell death by necroptosis.

Garnish SE, Meng Y, Koide A, Sandow JJ, Denbaum E, Jacobsen AV, Yeung W, Samson AL, Horne CR, Fitzgibbon C, Young SN, Smith PPC, Webb AI, Petrie EJ, Hildebrand JM, Kannan N, Czabotar PE, Koide S, Murphy JM. Garnish SE, et al. Among authors: koide s, koide a. Nat Commun. 2021 Apr 13;12(1):2211. doi: 10.1038/s41467-021-22400-z. Nat Commun. 2021. PMID: 33850121 Free PMC article.

2

A stable single-layer beta-sheet without a hydrophobic core.

Pham TN, Koide A, Koide S. Pham TN, et al. Among authors: koide s, koide a. Nat Struct Biol. 1998 Feb;5(2):115-9. doi: 10.1038/nsb0298-115. Nat Struct Biol. 1998. PMID: 9461076

3

The fibronectin type III domain as a scaffold for novel binding proteins.

Koide A, Bailey CW, Huang X, Koide S. Koide A, et al. Among authors: koide s. J Mol Biol. 1998 Dec 11;284(4):1141-51. doi: 10.1006/jmbi.1998.2238. J Mol Biol. 1998. PMID: 9837732 Free article.

4

Design of single-layer beta-sheets without a hydrophobic core.

Koide S, Huang X, Link K, Koide A, Bu Z, Engelman DM. Koide S, et al. Among authors: koide a. Nature. 2000 Jan 27;403(6768):456-60. doi: 10.1038/35000255. Nature. 2000. PMID: 10667801

5

Solution conformation and amyloid-like fibril formation of a polar peptide derived from a beta-hairpin in the OspA single-layer beta-sheet.

Ohnishi S, Koide A, Koide S. Ohnishi S, et al. Among authors: koide s, koide a. J Mol Biol. 2000 Aug 11;301(2):477-89. doi: 10.1006/jmbi.2000.3980. J Mol Biol. 2000. PMID: 10926522 Free article.

6

The roles of turn formation and cross-strand interactions in fibrillization of peptides derived from the OspA single-layer beta-sheet.

Ohnishi S, Koide A, Koide S. Ohnishi S, et al. Among authors: koide s, koide a. Protein Sci. 2001 Oct;10(10):2083-92. doi: 10.1110/ps.15901. Protein Sci. 2001. PMID: 11567099 Free PMC article.

7

Probing protein conformational changes in living cells by using designer binding proteins: application to the estrogen receptor.

Koide A, Abbatiello S, Rothgery L, Koide S. Koide A, et al. Among authors: koide s. Proc Natl Acad Sci U S A. 2002 Feb 5;99(3):1253-8. doi: 10.1073/pnas.032665299. Epub 2002 Jan 29. Proc Natl Acad Sci U S A. 2002. PMID: 11818562 Free PMC article.

8

Engineered fibronectin type III domain with a RGDWXE sequence binds with enhanced affinity and specificity to human alphavbeta3 integrin.

Richards J, Miller M, Abend J, Koide A, Koide S, Dewhurst S. Richards J, et al. Among authors: koide s, koide a. J Mol Biol. 2003 Mar 7;326(5):1475-88. doi: 10.1016/s0022-2836(03)00082-2. J Mol Biol. 2003. PMID: 12595259

9

Exploring the potential of the monobody scaffold: effects of loop elongation on the stability of a fibronectin type III domain.

Batori V, Koide A, Koide S. Batori V, et al. Among authors: koide s, koide a. Protein Eng. 2002 Dec;15(12):1015-20. doi: 10.1093/protein/15.12.1015. Protein Eng. 2002. PMID: 12601141

10

Conformational heterogeneity of an equilibrium folding intermediate quantified and mapped by scanning mutagenesis.

Yan S, Gawlak G, Smith J, Silver L, Koide A, Koide S. Yan S, et al. Among authors: koide s, koide a. J Mol Biol. 2004 May 7;338(4):811-25. doi: 10.1016/j.jmb.2004.02.063. J Mol Biol. 2004. PMID: 15099747

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