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Circadian Proteomic Analysis Uncovers Mechanisms of Post-Transcriptional Regulation in Metabolic Pathways.
Hurley JM, Jankowski MS, De Los Santos H, Crowell AM, Fordyce SB, Zucker JD, Kumar N, Purvine SO, Robinson EW, Shukla A, Zink E, Cannon WR, Baker SE, Loros JJ, Dunlap JC. Hurley JM, et al. Among authors: baker se. Cell Syst. 2018 Dec 26;7(6):613-626.e5. doi: 10.1016/j.cels.2018.10.014. Epub 2018 Dec 12. Cell Syst. 2018. PMID: 30553726 Free PMC article.
High-Throughput Large-Scale Targeted Proteomics Assays for Quantifying Pathway Proteins in Pseudomonas putida KT2440.
Gao Y, Fillmore TL, Munoz N, Bentley GJ, Johnson CW, Kim J, Meadows JA, Zucker JD, Burnet MC, Lipton AK, Bilbao A, Orton DJ, Kim YM, Moore RJ, Robinson EW, Baker SE, Webb-Robertson BM, Guss AM, Gladden JM, Beckham GT, Magnuson JK, Burnum-Johnson KE. Gao Y, et al. Among authors: baker se. Front Bioeng Biotechnol. 2020 Dec 2;8:603488. doi: 10.3389/fbioe.2020.603488. eCollection 2020. Front Bioeng Biotechnol. 2020. PMID: 33425868 Free PMC article.
Multi-Omics Driven Metabolic Network Reconstruction and Analysis of Lignocellulosic Carbon Utilization in Rhodosporidium toruloides.
Kim J, Coradetti ST, Kim YM, Gao Y, Yaegashi J, Zucker JD, Munoz N, Zink EM, Burnum-Johnson KE, Baker SE, Simmons BA, Skerker JM, Gladden JM, Magnuson JK. Kim J, et al. Among authors: baker se. Front Bioeng Biotechnol. 2021 Jan 8;8:612832. doi: 10.3389/fbioe.2020.612832. eCollection 2020. Front Bioeng Biotechnol. 2021. PMID: 33585414 Free PMC article.
Integration of Proteomics and Metabolomics Into the Design, Build, Test, Learn Cycle to Improve 3-Hydroxypropionic Acid Production in Aspergillus pseudoterreus.
Pomraning KR, Dai Z, Munoz N, Kim YM, Gao Y, Deng S, Kim J, Hofstad BA, Swita MS, Lemmon T, Collett JR, Panisko EA, Webb-Robertson BM, Zucker JD, Nicora CD, De Paoli H, Baker SE, Burnum-Johnson KE, Hillson NJ, Magnuson JK. Pomraning KR, et al. Among authors: baker se. Front Bioeng Biotechnol. 2021 Apr 7;9:603832. doi: 10.3389/fbioe.2021.603832. eCollection 2021. Front Bioeng Biotechnol. 2021. PMID: 33898398 Free PMC article.
Itaconic acid production is regulated by LaeA in Aspergillus pseudoterreus.
Pomraning KR, Dai Z, Munoz N, Kim YM, Gao Y, Deng S, Lemmon T, Swita MS, Zucker JD, Kim J, Mondo SJ, Panisko E, Burnet MC, Webb-Robertson BM, Hofstad B, Baker SE, Burnum-Johnson KE, Magnuson JK; Agile BioFoundry. Pomraning KR, et al. Among authors: baker se. Metab Eng Commun. 2022 Aug 24;15:e00203. doi: 10.1016/j.mec.2022.e00203. eCollection 2022 Dec. Metab Eng Commun. 2022. PMID: 36065328 Free PMC article.
317 results