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High dimensional profiling identifies specific immune types along the recovery trajectories of critically ill COVID19 patients.
Penttilä PA, Van Gassen S, Panovska D, Vanderbeke L, Van Herck Y, Quintelier K, Emmaneel A, Filtjens J, Malengier-Devlies B, Ahmadzadeh K, Van Mol P, Borràs DM, Antoranz A, Bosisio FM, Wauters E, Martinod K, Matthys P, Saeys Y, Garg AD, Wauters J, De Smet F; CONTAGIOUS consortium. Penttilä PA, et al. Among authors: saeys y. Cell Mol Life Sci. 2021 Apr;78(8):3987-4002. doi: 10.1007/s00018-021-03808-8. Epub 2021 Mar 13. Cell Mol Life Sci. 2021. PMID: 33715015 Free PMC article.
Defining and benchmarking open problems in single-cell analysis.
Luecken MD, Gigante S, Burkhardt DB, Cannoodt R, Strobl DC, Markov NS, Zappia L, Palla G, Lewis W, Dimitrov D, Vinyard ME, Magruder DS, Andersson A, Dann E, Qin Q, Otto DJ, Klein M, Botvinnik OB, Deconinck L, Waldrant K; Open Problems Jamboree Members; Bloom JM, Pisco AO, Saez-Rodriguez J, Wulsin D, Pinello L, Saeys Y, Theis FJ, Krishnaswamy S. Luecken MD, et al. Among authors: saeys y. Res Sq [Preprint]. 2024 Apr 4:rs.3.rs-4181617. doi: 10.21203/rs.3.rs-4181617/v1. Res Sq. 2024. PMID: 38645152 Free PMC article. Preprint.
A Murine Intestinal Intraepithelial NKp46-Negative Innate Lymphoid Cell Population Characterized by Group 1 Properties.
Van Acker A, Gronke K, Biswas A, Martens L, Saeys Y, Filtjens J, Taveirne S, Van Ammel E, Kerre T, Matthys P, Taghon T, Vandekerckhove B, Plum J, Dunay IR, Diefenbach A, Leclercq G. Van Acker A, et al. Among authors: saeys y. Cell Rep. 2017 May 16;19(7):1431-1443. doi: 10.1016/j.celrep.2017.04.068. Cell Rep. 2017. PMID: 28514662 Free article.
Myeloid cell heterogeneity in cancer: not a single cell alike.
Kiss M, Van Gassen S, Movahedi K, Saeys Y, Laoui D. Kiss M, et al. Among authors: saeys y. Cell Immunol. 2018 Aug;330:188-201. doi: 10.1016/j.cellimm.2018.02.008. Epub 2018 Feb 14. Cell Immunol. 2018. PMID: 29482836 Review.
A Computational Pipeline for the Diagnosis of CVID Patients.
Emmaneel A, Bogaert DJ, Van Gassen S, Tavernier SJ, Dullaers M, Haerynck F, Saeys Y. Emmaneel A, et al. Among authors: saeys y. Front Immunol. 2019 Aug 30;10:2009. doi: 10.3389/fimmu.2019.02009. eCollection 2019. Front Immunol. 2019. PMID: 31543876 Free PMC article.
CytoNorm: A Normalization Algorithm for Cytometry Data.
Van Gassen S, Gaudilliere B, Angst MS, Saeys Y, Aghaeepour N. Van Gassen S, et al. Among authors: saeys y. Cytometry A. 2020 Mar;97(3):268-278. doi: 10.1002/cyto.a.23904. Epub 2019 Oct 21. Cytometry A. 2020. PMID: 31633883 Free PMC article.
171 results