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Page 1
Agent Based Models of Polymicrobial Biofilms and the Microbiome-A Review.
Koshy-Chenthittayil S, Archambault L, Senthilkumar D, Laubenbacher R, Mendes P, Dongari-Bagtzoglou A. Koshy-Chenthittayil S, et al. Among authors: mendes p. Microorganisms. 2021 Feb 17;9(2):417. doi: 10.3390/microorganisms9020417. Microorganisms. 2021. PMID: 33671308 Free PMC article. Review.
Understanding Lactobacillus paracasei and Streptococcus oralis Biofilm Interactions through Agent-Based Modeling.
Archambault L, Koshy-Chenthittayil S, Thompson A, Dongari-Bagtzoglou A, Laubenbacher R, Mendes P. Archambault L, et al. Among authors: mendes p. mSphere. 2021 Dec 22;6(6):e0087521. doi: 10.1128/mSphere.00875-21. Epub 2021 Dec 15. mSphere. 2021. Corrected and republished in: mSphere. 2023 Apr 20;8(2):e0065622. doi: 10.1128/msphere.00656-22 PMID: 34908459 Free PMC article. Corrected and republished.
A general map of iron metabolism and tissue-specific subnetworks.
Hower V, Mendes P, Torti FM, Laubenbacher R, Akman S, Shulaev V, Torti SV. Hower V, et al. Among authors: mendes p. Mol Biosyst. 2009 May;5(5):422-43. doi: 10.1039/b816714c. Epub 2009 Mar 6. Mol Biosyst. 2009. PMID: 19381358 Free PMC article. Review.
A systems biology view of cancer.
Laubenbacher R, Hower V, Jarrah A, Torti SV, Shulaev V, Mendes P, Torti FM, Akman S. Laubenbacher R, et al. Among authors: mendes p. Biochim Biophys Acta. 2009 Dec;1796(2):129-39. doi: 10.1016/j.bbcan.2009.06.001. Epub 2009 Jun 6. Biochim Biophys Acta. 2009. PMID: 19505535 Free PMC article. Review.
Bioinformatics tools for cancer metabolomics.
Blekherman G, Laubenbacher R, Cortes DF, Mendes P, Torti FM, Akman S, Torti SV, Shulaev V. Blekherman G, et al. Among authors: mendes p. Metabolomics. 2011 Sep;7(3):329-343. doi: 10.1007/s11306-010-0270-3. Epub 2011 Jan 12. Metabolomics. 2011. PMID: 21949492 Free PMC article.
The core control system of intracellular iron homeostasis: a mathematical model.
Chifman J, Kniss A, Neupane P, Williams I, Leung B, Deng Z, Mendes P, Hower V, Torti FM, Akman SA, Torti SV, Laubenbacher R. Chifman J, et al. Among authors: mendes p. J Theor Biol. 2012 May 7;300:91-9. doi: 10.1016/j.jtbi.2012.01.024. Epub 2012 Jan 23. J Theor Biol. 2012. PMID: 22286016 Free PMC article.
Reproducible Research Using Biomodels.
Mendes P. Mendes P. Bull Math Biol. 2018 Dec;80(12):3081-3087. doi: 10.1007/s11538-018-0498-z. Epub 2018 Sep 6. Bull Math Biol. 2018. PMID: 30191472 Free PMC article.
556 results