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MEDALT: single-cell copy number lineage tracing enabling gene discovery.
Wang F, Wang Q, Mohanty V, Liang S, Dou J, Han J, Minussi DC, Gao R, Ding L, Navin N, Chen K. Wang F, et al. Among authors: mohanty v. Genome Biol. 2021 Feb 23;22(1):70. doi: 10.1186/s13059-021-02291-5. Genome Biol. 2021. PMID: 33622385 Free PMC article.
Integrated transcriptomic-genomic tool Texomer profiles cancer tissues.
Wang F, Zhang S, Kim TB, Lin YY, Iqbal R, Wang Z, Mohanty V, Sircar K, Karam JA, Wendl MC, Meric-Bernstam F, Weinstein JN, Ding L, Mills GB, Chen K. Wang F, et al. Among authors: mohanty v. Nat Methods. 2019 May;16(5):401-404. doi: 10.1038/s41592-019-0388-9. Epub 2019 Apr 15. Nat Methods. 2019. PMID: 30988467 Free PMC article.
Targeting the αv integrin/TGF-β axis improves natural killer cell function against glioblastoma stem cells.
Shaim H, Shanley M, Basar R, Daher M, Gumin J, Zamler DB, Uprety N, Wang F, Huang Y, Gabrusiewicz K, Miao Q, Dou J, Alsuliman A, Kerbauy LN, Acharya S, Mohanty V, Mendt M, Li S, Lu J, Wei J, Fowlkes NW, Gokdemir E, Ensley EL, Kaplan M, Kassab C, Li L, Ozcan G, Banerjee PP, Shen Y, Gilbert AL, Jones CM, Bdiwi M, Nunez-Cortes AK, Liu E, Yu J, Imahashi N, Muniz-Feliciano L, Li Y, Hu J, Draetta G, Marin D, Yu D, Mielke S, Eyrich M, Champlin RE, Chen K, Lang FF, Shpall EJ, Heimberger AB, Rezvani K. Shaim H, et al. Among authors: mohanty v. J Clin Invest. 2021 Jul 15;131(14):e142116. doi: 10.1172/JCI142116. J Clin Invest. 2021. PMID: 34138753 Free PMC article.
Decoupling Lineage-Associated Genes in Acute Myeloid Leukemia Reveals Inflammatory and Metabolic Signatures Associated With Outcomes.
Abbas HA, Mohanty V, Wang R, Huang Y, Liang S, Wang F, Zhang J, Qiu Y, Hu CW, Qutub AA, Dail M, Bolen CR, Daver N, Konopleva M, Futreal A, Chen K, Wang L, Kornblau SM. Abbas HA, et al. Among authors: mohanty v. Front Oncol. 2021 Aug 4;11:705627. doi: 10.3389/fonc.2021.705627. eCollection 2021. Front Oncol. 2021. PMID: 34422660 Free PMC article.
Sensei: how many samples to tell a change in cell type abundance?
Liang S, Willis J, Dou J, Mohanty V, Huang Y, Vilar E, Chen K. Liang S, et al. Among authors: mohanty v. BMC Bioinformatics. 2022 Jan 4;23(1):2. doi: 10.1186/s12859-021-04526-5. BMC Bioinformatics. 2022. PMID: 34983369 Free PMC article.
Bi-order multimodal integration of single-cell data.
Dou J, Liang S, Mohanty V, Miao Q, Huang Y, Liang Q, Cheng X, Kim S, Choi J, Li Y, Li L, Daher M, Basar R, Rezvani K, Chen R, Chen K. Dou J, et al. Among authors: mohanty v. Genome Biol. 2022 May 9;23(1):112. doi: 10.1186/s13059-022-02679-x. Genome Biol. 2022. PMID: 35534898 Free PMC article.
KLF5 governs sphingolipid metabolism and barrier function of the skin.
Lyu Y, Guan Y, Deliu L, Humphrey E, Frontera JK, Yang YJ, Zamler D, Kim KH, Mohanty V, Jin K, Mohanty V, Liu V, Dou J, Veillon LJ, Kumar SV, Lorenzi PL, Chen Y, McAndrews KM, Grivennikov S, Song X, Zhang J, Xi Y, Wang J, Chen K, Nagarajan P, Ge Y. Lyu Y, et al. Among authors: mohanty v. Genes Dev. 2022 Aug 25;36(13-14):822-42. doi: 10.1101/gad.349662.122. Online ahead of print. Genes Dev. 2022. PMID: 36008138 Free PMC article.
117 results