Hellmann I - Search Results

1

TAMEP are brain tumor parenchymal cells controlling neoplastic angiogenesis and progression.

Kälin RE, Cai L, Li Y, Zhao D, Zhang H, Cheng J, Zhang W, Wu Y, Eisenhut K, Janssen P, Schmitt L, Enard W, Michels F, Flüh C, Hou M, Kirchleitner SV, Siller S, Schiemann M, Andrä I, Montanez E, Giachino C, Taylor V, Synowitz M, Tonn JC, von Baumgarten L, Schulz C, Hellmann I, Glass R. Kälin RE, et al. Among authors: hellmann i. Cell Syst. 2021 Mar 17;12(3):248-262.e7. doi: 10.1016/j.cels.2021.01.002. Epub 2021 Feb 15. Cell Syst. 2021. PMID: 33592194 Free article.

2

The impact of amplification on differential expression analyses by RNA-seq.

Parekh S, Ziegenhain C, Vieth B, Enard W, Hellmann I. Parekh S, et al. Among authors: hellmann i. Sci Rep. 2016 May 9;6:25533. doi: 10.1038/srep25533. Sci Rep. 2016. PMID: 27156886 Free PMC article.

3

Comparative Analysis of Single-Cell RNA Sequencing Methods.

Ziegenhain C, Vieth B, Parekh S, Reinius B, Guillaumet-Adkins A, Smets M, Leonhardt H, Heyn H, Hellmann I, Enard W. Ziegenhain C, et al. Among authors: hellmann i. Mol Cell. 2017 Feb 16;65(4):631-643.e4. doi: 10.1016/j.molcel.2017.01.023. Mol Cell. 2017. PMID: 28212749 Free article.

4

powsimR: power analysis for bulk and single cell RNA-seq experiments.

Vieth B, Ziegenhain C, Parekh S, Enard W, Hellmann I. Vieth B, et al. Among authors: hellmann i. Bioinformatics. 2017 Nov 1;33(21):3486-3488. doi: 10.1093/bioinformatics/btx435. Bioinformatics. 2017. PMID: 29036287

5

Quantitative single-cell transcriptomics.

Ziegenhain C, Vieth B, Parekh S, Hellmann I, Enard W. Ziegenhain C, et al. Among authors: hellmann i. Brief Funct Genomics. 2018 Jul 1;17(4):220-232. doi: 10.1093/bfgp/ely009. Brief Funct Genomics. 2018. PMID: 29579145 Free PMC article. Review.

6

zUMIs - A fast and flexible pipeline to process RNA sequencing data with UMIs.

Parekh S, Ziegenhain C, Vieth B, Enard W, Hellmann I. Parekh S, et al. Among authors: hellmann i. Gigascience. 2018 Jun 1;7(6):giy059. doi: 10.1093/gigascience/giy059. Gigascience. 2018. PMID: 29846586 Free PMC article.

7

A systematic evaluation of single cell RNA-seq analysis pipelines.

Vieth B, Parekh S, Ziegenhain C, Enard W, Hellmann I. Vieth B, et al. Among authors: hellmann i. Nat Commun. 2019 Oct 11;10(1):4667. doi: 10.1038/s41467-019-12266-7. Nat Commun. 2019. PMID: 31604912 Free PMC article.

8

Adverse stem cell clones within a single patient's tumor predict clinical outcome in AML patients.

Zeller C, Richter D, Jurinovic V, Valtierra-Gutiérrez IA, Jayavelu AK, Mann M, Bagnoli JW, Hellmann I, Herold T, Enard W, Vick B, Jeremias I. Zeller C, et al. Among authors: hellmann i. J Hematol Oncol. 2022 Mar 12;15(1):25. doi: 10.1186/s13045-022-01232-4. J Hematol Oncol. 2022. PMID: 35279202 Free PMC article.

9

Regulatory and coding sequences of TRNP1 co-evolve with brain size and cortical folding in mammals.

Kliesmete Z, Wange LE, Vieth B, Esgleas M, Radmer J, Hülsmann M, Geuder J, Richter D, Ohnuki M, Götz M, Hellmann I, Enard W. Kliesmete Z, et al. Among authors: hellmann i. Elife. 2023 Mar 22;12:e83593. doi: 10.7554/eLife.83593. Elife. 2023. PMID: 36947129 Free PMC article.

10

The effect of background noise and its removal on the analysis of single-cell expression data.

Janssen P, Kliesmete Z, Vieth B, Adiconis X, Simmons S, Marshall J, McCabe C, Heyn H, Levin JZ, Enard W, Hellmann I. Janssen P, et al. Among authors: hellmann i. Genome Biol. 2023 Jun 19;24(1):140. doi: 10.1186/s13059-023-02978-x. Genome Biol. 2023. PMID: 37337297 Free PMC article.

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