Naba A - Search Results

1

The in-silico characterization of the Caenorhabditis elegans matrisome and proposal of a novel collagen classification.

Teuscher AC, Jongsma E, Davis MN, Statzer C, Gebauer JM, Naba A, Ewald CY. Teuscher AC, et al. Among authors: naba a. Matrix Biol Plus. 2019 Feb 21;1:100001. doi: 10.1016/j.mbplus.2018.11.001. eCollection 2019 Feb. Matrix Biol Plus. 2019. PMID: 33543001 Free PMC article.

2

The novel ECM protein SNED1 mediates cell adhesion via the RGD-binding integrins α5β1 and αvβ3.

Pally D, Kapoor N, Naba A. Pally D, et al. Among authors: naba a. bioRxiv [Preprint]. 2024 Nov 21:2024.08.07.606706. doi: 10.1101/2024.08.07.606706. bioRxiv. 2024. Update in: J Cell Sci. 2024 Dec 23:jcs.263479. doi: 10.1242/jcs.263479 PMID: 39149327 Free PMC article. Updated. Preprint.

3

Advances and prospects for the Human BioMolecular Atlas Program (HuBMAP).

Jain S, Pei L, Spraggins JM, Angelo M, Carson JP, Gehlenborg N, Ginty F, Gonçalves JP, Hagood JS, Hickey JW, Kelleher NL, Laurent LC, Lin S, Lin Y, Liu H, Naba A, Nakayasu ES, Qian WJ, Radtke A, Robson P, Stockwell BR, Van de Plas R, Vlachos IS, Zhou M; HuBMAP Consortium; Börner K, Snyder MP. Jain S, et al. Among authors: naba a. Nat Cell Biol. 2023 Aug;25(8):1089-1100. doi: 10.1038/s41556-023-01194-w. Epub 2023 Jul 19. Nat Cell Biol. 2023. PMID: 37468756 Free PMC article. Review.

4

The in-silico zebrafish matrisome: A new tool to study extracellular matrix gene and protein functions.

Nauroy P, Hughes S, Naba A, Ruggiero F. Nauroy P, et al. Among authors: naba a. Matrix Biol. 2018 Jan;65:5-13. doi: 10.1016/j.matbio.2017.07.001. Epub 2017 Jul 21. Matrix Biol. 2018. PMID: 28739138

5

The cancer matrisome: From comprehensive characterization to biomarker discovery.

Socovich AM, Naba A. Socovich AM, et al. Among authors: naba a. Semin Cell Dev Biol. 2019 May;89:157-166. doi: 10.1016/j.semcdb.2018.06.005. Epub 2018 Jul 13. Semin Cell Dev Biol. 2019. PMID: 29964200 Review.

6

Pan-Cancer Analysis of the Genomic Alterations and Mutations of the Matrisome.

Izzi V, Davis MN, Naba A. Izzi V, et al. Among authors: naba a. Cancers (Basel). 2020 Jul 24;12(8):2046. doi: 10.3390/cancers12082046. Cancers (Basel). 2020. PMID: 32722287 Free PMC article.

7

In-silico definition of the Drosophila melanogaster matrisome.

Davis MN, Horne-Badovinac S, Naba A. Davis MN, et al. Among authors: naba a. Matrix Biol Plus. 2019 Oct 30;4:100015. doi: 10.1016/j.mbplus.2019.100015. eCollection 2019 Nov. Matrix Biol Plus. 2019. PMID: 33543012 Free PMC article.

8

Computational and experimental characterization of the novel ECM glycoprotein SNED1 and prediction of its interactome.

Vallet SD, Davis MN, Barqué A, Thahab AH, Ricard-Blum S, Naba A. Vallet SD, et al. Among authors: naba a. Biochem J. 2021 Apr 16;478(7):1413-1434. doi: 10.1042/BCJ20200675. Biochem J. 2021. PMID: 33724335

9

Systematic Analysis of Actively Transcribed Core Matrisome Genes Across Tissues and Cell Phenotypes.

Tellman TV, Dede M, Aggarwal VA, Salmon D, Naba A, Farach-Carson MC. Tellman TV, et al. Among authors: naba a. Matrix Biol. 2022 Aug;111:95-107. doi: 10.1016/j.matbio.2022.06.003. Epub 2022 Jun 14. Matrix Biol. 2022. PMID: 35714875

10

Spatial-omics: Novel approaches to probe cell heterogeneity and extracellular matrix biology.

Bingham GC, Lee F, Naba A, Barker TH. Bingham GC, et al. Among authors: naba a. Matrix Biol. 2020 Sep;91-92:152-166. doi: 10.1016/j.matbio.2020.04.004. Epub 2020 May 19. Matrix Biol. 2020. PMID: 32416243 Free PMC article. Review.

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