Llabrés M - Search Results

1

VPF-Class: taxonomic assignment and host prediction of uncultivated viruses based on viral protein families.

Pons JC, Paez-Espino D, Riera G, Ivanova N, Kyrpides NC, Llabrés M. Pons JC, et al. Among authors: llabres m. Bioinformatics. 2021 Jul 27;37(13):1805-1813. doi: 10.1093/bioinformatics/btab026. Bioinformatics. 2021. PMID: 33471063 Free PMC article.

2

A distance metric for a class of tree-sibling phylogenetic networks.

Cardona G, Llabrés M, Rosselló F, Valiente G. Cardona G, et al. Among authors: llabres m. Bioinformatics. 2008 Jul 1;24(13):1481-8. doi: 10.1093/bioinformatics/btn231. Epub 2008 May 12. Bioinformatics. 2008. PMID: 18477576 Free PMC article.

3

IMG/VR v.2.0: an integrated data management and analysis system for cultivated and environmental viral genomes.

Paez-Espino D, Roux S, Chen IA, Palaniappan K, Ratner A, Chu K, Huntemann M, Reddy TBK, Pons JC, Llabrés M, Eloe-Fadrosh EA, Ivanova NN, Kyrpides NC. Paez-Espino D, et al. Among authors: llabres m. Nucleic Acids Res. 2019 Jan 8;47(D1):D678-D686. doi: 10.1093/nar/gky1127. Nucleic Acids Res. 2019. PMID: 30407573 Free PMC article.

4

Alignment of biological networks by integer linear programming: virus-host protein-protein interaction networks.

Llabrés M, Riera G, Rosselló F, Valiente G. Llabrés M, et al. BMC Bioinformatics. 2020 Nov 18;21(Suppl 6):434. doi: 10.1186/s12859-020-03733-w. BMC Bioinformatics. 2020. PMID: 33203352 Free PMC article.

5

AligNet: alignment of protein-protein interaction networks.

Alcalá A, Alberich R, Llabrés M, Rosselló F, Valiente G. Alcalá A, et al. Among authors: llabres m. BMC Bioinformatics. 2020 Nov 18;21(Suppl 6):265. doi: 10.1186/s12859-020-3502-1. BMC Bioinformatics. 2020. PMID: 33203353 Free PMC article.

6

Alignment of virus-host protein-protein interaction networks by integer linear programming: SARS-CoV-2.

Llabrés M, Valiente G. Llabrés M, et al. PLoS One. 2020 Dec 7;15(12):e0236304. doi: 10.1371/journal.pone.0236304. eCollection 2020. PLoS One. 2020. PMID: 33284827 Free PMC article.

7

Editorial: Influence of Protein-Protein Interactions (PPIs) on the Outcome of Viral Infections.

Jangra RK, Llabrés M, Guardado-Calvo P, Mittler E, Lasso G. Jangra RK, et al. Among authors: llabres m. Front Microbiol. 2022 Jun 27;13:943379. doi: 10.3389/fmicb.2022.943379. eCollection 2022. Front Microbiol. 2022. PMID: 35832810 Free PMC article. No abstract available.

8

Metrics for phylogenetic networks II: nodal and triplets metrics.

Cardona G, Llabrés M, Rosselló F, Valiente G. Cardona G, et al. Among authors: llabres m. IEEE/ACM Trans Comput Biol Bioinform. 2009 Jul-Sep;6(3):454-69. doi: 10.1109/TCBB.2008.127. IEEE/ACM Trans Comput Biol Bioinform. 2009. PMID: 19644173

9

On Nakhleh's metric for reduced phylogenetic networks.

Cardona G, Llabrés M, Rosselló F, Valiente G. Cardona G, et al. Among authors: llabres m. IEEE/ACM Trans Comput Biol Bioinform. 2009 Oct-Dec;6(4):629-38. doi: 10.1109/TCBB.2009.33. IEEE/ACM Trans Comput Biol Bioinform. 2009. PMID: 19875861

10

Comparison of galled trees.

Cardona G, Llabrés M, Rosselló F, Valiente G. Cardona G, et al. Among authors: llabres m. IEEE/ACM Trans Comput Biol Bioinform. 2011 Mar-Apr;8(2):410-27. doi: 10.1109/TCBB.2010.60. IEEE/ACM Trans Comput Biol Bioinform. 2011. PMID: 20660951

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