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Stability of SARS-CoV-2 phylogenies.
Turakhia Y, De Maio N, Thornlow B, Gozashti L, Lanfear R, Walker CR, Hinrichs AS, Fernandes JD, Borges R, Slodkowicz G, Weilguny L, Haussler D, Goldman N, Corbett-Detig R. Turakhia Y, et al. Among authors: walker cr. PLoS Genet. 2020 Nov 18;16(11):e1009175. doi: 10.1371/journal.pgen.1009175. eCollection 2020 Nov. PLoS Genet. 2020. PMID: 33206635 Free PMC article.
Mutation Rates and Selection on Synonymous Mutations in SARS-CoV-2.
De Maio N, Walker CR, Turakhia Y, Lanfear R, Corbett-Detig R, Goldman N. De Maio N, et al. Among authors: walker cr. Genome Biol Evol. 2021 May 7;13(5):evab087. doi: 10.1093/gbe/evab087. Genome Biol Evol. 2021. PMID: 33895815 Free PMC article.
Paired CRISPR screens to map gene regulation in cis and trans.
Xue X, Gajic ZZ, Caragine CM, Legut M, Walker C, Kim JYS, Wang X, Yan RE, Wessels HH, Lu C, Bapodra N, Gürsoy G, Sanjana NE. Xue X, et al. bioRxiv [Preprint]. 2024 Nov 27:2024.11.27.625752. doi: 10.1101/2024.11.27.625752. bioRxiv. 2024. PMID: 39651170 Free PMC article. Preprint.
A Phylodynamic Workflow to Rapidly Gain Insights into the Dispersal History and Dynamics of SARS-CoV-2 Lineages.
Dellicour S, Durkin K, Hong SL, Vanmechelen B, Martí-Carreras J, Gill MS, Meex C, Bontems S, André E, Gilbert M, Walker C, Maio N, Faria NR, Hadfield J, Hayette MP, Bours V, Wawina-Bokalanga T, Artesi M, Baele G, Maes P. Dellicour S, et al. Mol Biol Evol. 2021 Apr 13;38(4):1608-1613. doi: 10.1093/molbev/msaa284. Mol Biol Evol. 2021. PMID: 33316043 Free PMC article.
Private information leakage from single-cell count matrices.
Walker CR, Li X, Chakravarthy M, Lounsbery-Scaife W, Choi YA, Singh R, Gürsoy G. Walker CR, et al. Cell. 2024 Nov 14;187(23):6537-6549.e10. doi: 10.1016/j.cell.2024.09.012. Epub 2024 Oct 2. Cell. 2024. PMID: 39362221 Free article.
98 results