Nakayoshi T - Search Results

1

Functional Characterization of 40 CYP3A4 Variants by Assessing Midazolam 1'-Hydroxylation and Testosterone 6β-Hydroxylation.

Kumondai M, Gutiérrez Rico EM, Hishinuma E, Ueda A, Saito S, Saigusa D, Tadaka S, Kinoshita K, Nakayoshi T, Oda A, Abe A, Maekawa M, Mano N, Hirasawa N, Hiratsuka M. Kumondai M, et al. Among authors: nakayoshi t. Drug Metab Dispos. 2021 Mar;49(3):212-220. doi: 10.1124/dmd.120.000261. Epub 2020 Dec 31. Drug Metab Dispos. 2021. PMID: 33384383

2

Validation of Molecular Dynamics Simulations for Prediction of Three-Dimensional Structures of Small Proteins.

Kato K, Nakayoshi T, Fukuyoshi S, Kurimoto E, Oda A. Kato K, et al. Among authors: nakayoshi t. Molecules. 2017 Oct 12;22(10):1716. doi: 10.3390/molecules22101716. Molecules. 2017. PMID: 29023395 Free PMC article.

3

Comparison of the activation energy barrier for succinimide formation from α- and β-aspartic acid residues obtained from density functional theory calculations.

Nakayoshi T, Kato K, Fukuyoshi S, Takahashi O, Kurimoto E, Oda A. Nakayoshi T, et al. Biochim Biophys Acta Proteins Proteom. 2018 Jul;1866(7):759-766. doi: 10.1016/j.bbapap.2017.12.011. Epub 2018 Jan 3. Biochim Biophys Acta Proteins Proteom. 2018. PMID: 29305913

4

Influences of conformations of peptides on stereoinversions and/or isomerizations of aspartic acid residues.

Oda A, Nakayoshi T, Fukuyoshi S, Kurimoto E, Takahashi O. Oda A, et al. Among authors: nakayoshi t. Biochim Biophys Acta Proteins Proteom. 2018 Jul;1866(7):783-788. doi: 10.1016/j.bbapap.2018.01.006. Epub 2018 Jan 11. Biochim Biophys Acta Proteins Proteom. 2018. PMID: 29331333

5

Validation of molecular force field parameters for peptides including isomerized amino acids.

Oda A, Nakayoshi T, Fukuyoshi S, Kurimoto E, Yamaotsu N, Hirono S, Takahashi O. Oda A, et al. Among authors: nakayoshi t. Chirality. 2018 Apr;30(4):332-341. doi: 10.1002/chir.22821. Epub 2018 Feb 2. Chirality. 2018. PMID: 29393985

6

Computational studies on the water-catalyzed stereoinversion mechanism of glutamic acid residues in peptides and proteins.

Nakayoshi T, Kato K, Fukuyoshi S, Takahashi O, Kurimoto E, Oda A. Nakayoshi T, et al. Chirality. 2018 May;30(5):527-535. doi: 10.1002/chir.22841. Epub 2018 Mar 12. Chirality. 2018. PMID: 29528512

7

Possible Mechanisms of Nonenzymatic Formation of Dehydroalanine Residue Catalyzed by Dihydrogen Phosphate Ion.

Nakayoshi T, Kato K, Kurimoto E, Oda A. Nakayoshi T, et al. J Phys Chem B. 2019 Apr 18;123(15):3147-3155. doi: 10.1021/acs.jpcb.8b10386. Epub 2019 Apr 9. J Phys Chem B. 2019. PMID: 30916562

8

Computational Studies on Water-Catalyzed Mechanisms for Stereoinversion of Glutarimide Intermediates Formed from Glutamic Acid Residues in Aqueous Phase.

Nakayoshi T, Fukuyoshi S, Kato K, Kurimoto E, Oda A. Nakayoshi T, et al. Int J Mol Sci. 2019 May 15;20(10):2410. doi: 10.3390/ijms20102410. Int J Mol Sci. 2019. PMID: 31096657 Free PMC article.

9

Three dimensional structures of putative, primitive proteins to investigate the origin of homochirality.

Oda A, Nakayoshi T, Kato K, Fukuyoshi S, Kurimoto E. Oda A, et al. Among authors: nakayoshi t. Sci Rep. 2019 Aug 12;9(1):11594. doi: 10.1038/s41598-019-48134-z. Sci Rep. 2019. PMID: 31406272 Free PMC article.

10

Computational Studies on the Nonenzymatic Deamidation Mechanisms of Glutamine Residues.

Kato K, Nakayoshi T, Kurimoto E, Oda A. Kato K, et al. Among authors: nakayoshi t. ACS Omega. 2019 Feb 18;4(2):3508-3513. doi: 10.1021/acsomega.8b03199. eCollection 2019 Feb 28. ACS Omega. 2019. PMID: 31459565 Free PMC article.

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