Li X - Search Results

1

Age-related transcriptome changes in melanoma patients with tumor-positive sentinel lymph nodes.

Menefee DS, McMasters A, Pan J, Li X, Xiao D, Waigel S, Zacharias W, Rai SN, McMasters KM, Hao H. Menefee DS, et al. Among authors: li x. Aging (Albany NY). 2020 Dec 29;12(24):24914-24939. doi: 10.18632/aging.202435. Epub 2020 Dec 29. Aging (Albany NY). 2020. PMID: 33373316 Free PMC article.

2

A comparison of per sample global scaling and per gene normalization methods for differential expression analysis of RNA-seq data.

Li X, Brock GN, Rouchka EC, Cooper NGF, Wu D, O'Toole TE, Gill RS, Eteleeb AM, O'Brien L, Rai SN. Li X, et al. PLoS One. 2017 May 1;12(5):e0176185. doi: 10.1371/journal.pone.0176185. eCollection 2017. PLoS One. 2017. PMID: 28459823 Free PMC article.

3

Sample size calculations for the differential expression analysis of RNA-seq data using a negative binomial regression model.

Li X, Wu D, Cooper NGF, Rai SN. Li X, et al. Stat Appl Genet Mol Biol. 2019 Jan 22;18(1):/j/sagmb.2019.18.issue-1/sagmb-2018-0021/sagmb-2018-0021.xml. doi: 10.1515/sagmb-2018-0021. Stat Appl Genet Mol Biol. 2019. PMID: 30667368

4

Comparative gene expression analysis in melanocytes driven by tumor cell-derived exosomes.

Xiao D, Li X, Rouchka EC, Waigel S, Zacharias W, McMasters KM, Hao H. Xiao D, et al. Among authors: li x. Exp Cell Res. 2020 Jan 1;386(1):111690. doi: 10.1016/j.yexcr.2019.111690. Epub 2019 Oct 31. Exp Cell Res. 2020. PMID: 31678172 Free PMC article.

5

Whole Transcriptome Analysis Reveals That Filifactor alocis Modulates TNFα-Stimulated MAPK Activation in Human Neutrophils.

Miralda I, Vashishta A, Rogers MN, Rouchka EC, Li X, Waigel S, Lamont RJ, Uriarte SM. Miralda I, et al. Among authors: li x. Front Immunol. 2020 Apr 16;11:497. doi: 10.3389/fimmu.2020.00497. eCollection 2020. Front Immunol. 2020. PMID: 32373107 Free PMC article.

6

A combined approach with gene-wise normalization improves the analysis of RNA-seq data in human breast cancer subtypes.

Li X, Rouchka EC, Brock GN, Yan J, O'Toole TE, Tieri DA, Cooper NGF. Li X, et al. PLoS One. 2018 Aug 8;13(8):e0201813. doi: 10.1371/journal.pone.0201813. eCollection 2018. PLoS One. 2018. PMID: 30089167 Free PMC article.

7

Differential gene expression analysis of palbociclib-resistant TNBC via RNA-seq.

Lanceta L, Lypova N, O'Neill C, Li X, Rouchka E, Chesney J, Imbert-Fernandez Y. Lanceta L, et al. Among authors: li x. Breast Cancer Res Treat. 2021 Apr;186(3):677-686. doi: 10.1007/s10549-021-06127-5. Epub 2021 Feb 18. Breast Cancer Res Treat. 2021. PMID: 33599863 Free PMC article.

8

Exposure to Fine Particulate Matter Air Pollution Alters mRNA and miRNA Expression in Bone Marrow-Derived Endothelial Progenitor Cells from Mice.

Li X, Haberzettl P, Conklin DJ, Bhatnagar A, Rouchka EC, Zhang M, O'Toole TE. Li X, et al. Genes (Basel). 2021 Jul 10;12(7):1058. doi: 10.3390/genes12071058. Genes (Basel). 2021. PMID: 34356074 Free PMC article.

9

Modeling microRNA-mRNA interactions using PLS regression in human colon cancer.

Li X, Gill R, Cooper NG, Yoo JK, Datta S. Li X, et al. BMC Med Genomics. 2011 May 19;4:44. doi: 10.1186/1755-8794-4-44. BMC Med Genomics. 2011. PMID: 21595958 Free PMC article.

10

Shoc2-tranduced ERK1/2 motility signals--Novel insights from functional genomics.

Jeoung M, Jang ER, Liu J, Wang C, Rouchka EC, Li X, Galperin E. Jeoung M, et al. Among authors: li x. Cell Signal. 2016 May;28(5):448-459. doi: 10.1016/j.cellsig.2016.02.005. Epub 2016 Feb 11. Cell Signal. 2016. PMID: 26876614 Free PMC article.

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