Ma Q - Search Results

1

Deep forest ensemble learning for classification of alignments of non-coding RNA sequences based on multi-view structure representations.

Li Y, Zhang Q, Liu Z, Wang C, Han S, Ma Q, Du W. Li Y, et al. Among authors: ma q. Brief Bioinform. 2021 Jul 20;22(4):bbaa354. doi: 10.1093/bib/bbaa354. Brief Bioinform. 2021. PMID: 33367506 Free PMC article.

2

RNA-TVcurve: a Web server for RNA secondary structure comparison based on a multi-scale similarity of its triple vector curve representation.

Li Y, Shi X, Liang Y, Xie J, Zhang Y, Ma Q. Li Y, et al. Among authors: ma q. BMC Bioinformatics. 2017 Jan 21;18(1):51. doi: 10.1186/s12859-017-1481-7. BMC Bioinformatics. 2017. PMID: 28109252 Free PMC article.

3

QUBIC: a bioconductor package for qualitative biclustering analysis of gene co-expression data.

Zhang Y, Xie J, Yang J, Fennell A, Zhang C, Ma Q. Zhang Y, et al. Among authors: ma q. Bioinformatics. 2017 Feb 1;33(3):450-452. doi: 10.1093/bioinformatics/btw635. Bioinformatics. 2017. PMID: 28172469

4

An algorithmic perspective of de novo cis-regulatory motif finding based on ChIP-seq data.

Liu B, Yang J, Li Y, McDermaid A, Ma Q. Liu B, et al. Among authors: ma q. Brief Bioinform. 2018 Sep 28;19(5):1069-1081. doi: 10.1093/bib/bbx026. Brief Bioinform. 2018. PMID: 28334268 Review.

5

LncFinder: an integrated platform for long non-coding RNA identification utilizing sequence intrinsic composition, structural information and physicochemical property.

Han S, Liang Y, Ma Q, Xu Y, Zhang Y, Du W, Wang C, Li Y. Han S, et al. Among authors: ma q. Brief Bioinform. 2019 Nov 27;20(6):2009-2027. doi: 10.1093/bib/bby065. Brief Bioinform. 2019. PMID: 30084867 Free PMC article. Review.

6

A New Machine Learning-Based Framework for Mapping Uncertainty Analysis in RNA-Seq Read Alignment and Gene Expression Estimation.

McDermaid A, Chen X, Zhang Y, Wang C, Gu S, Xie J, Ma Q. McDermaid A, et al. Among authors: ma q. Front Genet. 2018 Aug 14;9:313. doi: 10.3389/fgene.2018.00313. eCollection 2018. Front Genet. 2018. PMID: 30154828 Free PMC article.

7

Protein-protein interaction sites prediction by ensemble random forests with synthetic minority oversampling technique.

Wang X, Yu B, Ma A, Chen C, Liu B, Ma Q. Wang X, et al. Among authors: ma a, ma q. Bioinformatics. 2019 Jul 15;35(14):2395-2402. doi: 10.1093/bioinformatics/bty995. Bioinformatics. 2019. PMID: 30520961 Free PMC article.

8

IRIS-EDA: An integrated RNA-Seq interpretation system for gene expression data analysis.

Monier B, McDermaid A, Wang C, Zhao J, Miller A, Fennell A, Ma Q. Monier B, et al. Among authors: ma q. PLoS Comput Biol. 2019 Feb 14;15(2):e1006792. doi: 10.1371/journal.pcbi.1006792. eCollection 2019 Feb. PLoS Comput Biol. 2019. PMID: 30763315 Free PMC article.

9

Pancreatic cancer biomarker detection by two support vector strategies for recursive feature elimination.

Wang Y, Liu K, Ma Q, Tan Y, Du W, Lv Y, Tian Y, Wang H. Wang Y, et al. Among authors: ma q. Biomark Med. 2019 Feb;13(2):105-121. doi: 10.2217/bmm-2018-0273. Epub 2019 Feb 15. Biomark Med. 2019. PMID: 30767554 Free PMC article.

10

Using Machine Learning to Measure Relatedness Between Genes: A Multi-Features Model.

Wang Y, Yang S, Zhao J, Du W, Liang Y, Wang C, Zhou F, Tian Y, Ma Q. Wang Y, et al. Among authors: ma q. Sci Rep. 2019 Mar 12;9(1):4192. doi: 10.1038/s41598-019-40780-7. Sci Rep. 2019. PMID: 30862804 Free PMC article.

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